Pairwise Alignments

Query, 564 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Variovorax sp. SCN45

Subject, 533 a.a., Methyl-accepting chemotaxis sensor/transducer protein from Variovorax sp. SCN45

 Score =  367 bits (942), Expect = e-106
 Identities = 229/526 (43%), Positives = 328/526 (62%), Gaps = 25/526 (4%)

Query: 1   MTSFKNLRISTKLAFAFLSIVLLMIAMAVFSIHRLNRLNDQTNFMVTARMASVRDAGQM- 59
           M    NLRI T+LA AF  ++ L++    F++       + T  M+ + +A  R      
Sbjct: 1   MNFLSNLRIGTRLAVAFSVVLGLVVISTAFALLSARSNAEATRVMMESPLAKERLISDWY 60

Query: 60  ----SEAANRVRLLEFRLATAPASEVADVLRNIAEAFKTYDVVDKAYPASIGDPTEQSIY 115
               S  A    +      T P +    +  ++ +  +T   V+K     +  P E++I+
Sbjct: 61  VLTYSAIARTSMIARTTDETLPVTFADVISDSVKKGTETMAKVEKL----LVTPEEKAIF 116

Query: 116 DRVKARQPAWAAAHAKIEQLVQEDRRADAVNLLNGEARDAFRALREPLAQLVKH-----N 170
             +   +  + AA  ++ +        +         + A +A    + +L+       +
Sbjct: 117 KSIMELRAKYQAAKDEVGKAKASGNTVETTRAFKETFQPAAKAYESRVLELLSIERKAID 176

Query: 171 EDRARIEAEES---NVTFTTGAVLIASGAGLAFLLAVLLSWSVSRGIVVPLKDAVRLAEA 227
           +  A I+A  +   N++       +A GA  +FL        +SR IV PL  AV +AE 
Sbjct: 177 DMSASIDAANARALNLSLLLAMATVAIGAVFSFL--------ISRSIVRPLTRAVEVAET 228

Query: 228 VAAGDLTQRLNSDSKDEVGDLLRALAAMRDNLVQTLTGMRESSDSVATASAQIASGNSDL 287
           VAAGDL+  + ++S+DE G L++AL  M D+L + +  +R  ++++ATAS QIASGN DL
Sbjct: 229 VAAGDLSVDIRAESRDETGQLMQALKNMNDSLAKVVGEVRTGTETIATASGQIASGNHDL 288

Query: 288 SSRTEQTAGSLQRTAASMEELTSTVKTASEAASQANQLALTASKIAVHGGEVISEVVETM 347
           SSRTEQ A SL++TAASMEELTSTVK  ++ A QANQLA++AS++AV GG V+S+VV+TM
Sbjct: 289 SSRTEQQASSLEQTAASMEELTSTVKQNADNARQANQLAVSASEVAVKGGSVVSQVVDTM 348

Query: 348 RDIHGSSQKIAAIIGTIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRNLAQRSA 407
             I+ SS+KI  IIG IDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVR+LAQRSA
Sbjct: 349 GSINASSKKIVDIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSA 408

Query: 408 VAAKEIKTLIEASVDKVGSGSQLVNDAGATMGKIVESVQRVSNTVSEISAGAIEQAAGID 467
            AAKEIKTLI  SV+KV +GS+ V +AG TM +IV SV+RV++ + EI+A + EQ +GI+
Sbjct: 409 AAAKEIKTLIGDSVEKVEAGSKQVAEAGRTMDEIVGSVRRVTDIMGEITAASQEQTSGIE 468

Query: 468 QINSVVAQLEQMTQENSALVEESAAAAESLKGQADRLSTLVEFFQL 513
           QIN  + Q++Q+TQ+N+ALVEE++AAA+SL+ QA  LS +V  F+L
Sbjct: 469 QINQAITQMDQVTQQNAALVEEASAAAQSLQEQAGSLSQIVGVFRL 514



 Score = 38.1 bits (87), Expect = 9e-07
 Identities = 57/228 (25%), Positives = 82/228 (35%), Gaps = 55/228 (24%)

Query: 158 ALREPLAQLVKHNEDRAR------IEAEE---------SNVTFTTGAVLIASGA------ 196
           A  E L   VK N D AR      + A E         S V  T G++  +S        
Sbjct: 304 ASMEELTSTVKQNADNARQANQLAVSASEVAVKGGSVVSQVVDTMGSINASSKKIVDIIG 363

Query: 197 ---GLAFLLAVLL---------SWSVSRGIVVPLKDAVRLAEAVAA---------GDLTQ 235
              G+AF   +L          +    RG  V   +   LA+  AA         GD  +
Sbjct: 364 VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSAAAAKEIKTLIGDSVE 423

Query: 236 RLNSDSK---------DEVGDLLRALAAMRDNLV---QTLTGMRESSDSVATASAQIASG 283
           ++ + SK         DE+   +R +  +   +    Q  T   E  +   T   Q+   
Sbjct: 424 KVEAGSKQVAEAGRTMDEIVGSVRRVTDIMGEITAASQEQTSGIEQINQAITQMDQVTQQ 483

Query: 284 NSDLSSRTEQTAGSLQRTAASMEELTSTVKT-ASEAASQANQLALTAS 330
           N+ L       A SLQ  A S+ ++    +   S AA  A QLA TAS
Sbjct: 484 NAALVEEASAAAQSLQEQAGSLSQIVGVFRLEGSRAAGTARQLAFTAS 531