Pairwise Alignments

Query, 564 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Variovorax sp. SCN45

Subject, 562 a.a., HAMP domain-containing protein from Dickeya dianthicola ME23

 Score =  337 bits (863), Expect = 1e-96
 Identities = 211/563 (37%), Positives = 319/563 (56%), Gaps = 13/563 (2%)

Query: 8   RISTKLAFAFLSIVLLMIAMAVFSIHRLNRLNDQTNFMVTARMASVRDAGQMSEAANR-V 66
           RI  +L   F  + ++++ + + SI +L+  ++    +V        DA  + E  N  V
Sbjct: 7   RIGYRLGAGFAVLAVMLVCVGILSITKLSSFHNSARGIVQDIYPQTVDANTLIENVNEGV 66

Query: 67  RLLEFRLATAPASEVADVLRNIAEAFKTYDVVDKAYPASIG---DPTEQSIYDRVKARQP 123
           R+ +  L  +    +  V   IA   K    +  A         D   Q +   ++  + 
Sbjct: 67  RIFQQLLLVSGNDRINAVSDQIAPVSKEITRLMAALEKQANESRDVRNQQLIGDIRRIRA 126

Query: 124 AWAAAHAKIEQLVQEDRRADAVNLLNGEARDAFRALREPLAQLVKHNEDRARIEAEESNV 183
            +  +  K+  LV+   R +A+N  N     A R  R  + QLV + ++      +  + 
Sbjct: 127 QFLESGQKVVALVKASNRDEALNEFNQRLDPAQREYRNAVRQLVDYQDNAMMGTVDAMSA 186

Query: 184 TFTTGAVLIASGAGLAFLLAVLLSWSVSRGIVVPLKDAVRLAEAVAAGDLTQRLNSDSKD 243
           T+    +++ +   +  +L+V ++ +++R +  P++ A+ +A+ V+ GDLT +++S  KD
Sbjct: 187 TYHDIRLVLLAILAIGVVLSVWVAMAITRSVTQPIQQALVMADRVSRGDLTTQISSSRKD 246

Query: 244 EVGDLLRALAAMRDNLVQTLTGMRESSDSVATASAQIASGNSDLSSRTEQTAGSLQRTAA 303
           E G LL+AL  M  +L Q +  +R+ +++++TA++QIA+GN DLSSRTE+ A SL++TAA
Sbjct: 247 EAGLLLQALDHMNASLCQIVGQVRDGAEAISTAASQIAAGNQDLSSRTEEQASSLEQTAA 306

Query: 304 SMEELTSTVKTASEAASQANQLALTASKIAVHGGEVISEVVETMRDIHGSSQKIAAIIGT 363
           SMEEL ST+K  +E   QA  +A  AS  A   GEV+  V   MR I  +S ++A IIG 
Sbjct: 307 SMEELVSTIKNTAENTQQATSIANQASSAAHRSGEVMLSVTNKMRGIREASMRMAEIIGV 366

Query: 364 IDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRNLAQRSAVAAKEIKTLIEASVDK 423
           IDGIAFQTNILALNAAVEAARAGEQGRGFAVVA EVR+LAQRSA AAKEIK LI+ SVDK
Sbjct: 367 IDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRSLAQRSATAAKEIKELIDDSVDK 426

Query: 424 VGSGSQLVNDAGATMGKIVESVQRVSNTVSEISAGAIEQAAGIDQINSVVAQLEQMTQEN 483
           +  G QLV+ A +TM  +   V+ V + ++EIS  + EQ+ GI QIN  V Q++  TQ+N
Sbjct: 427 IQEGMQLVDTAESTMDGLTGHVKDVHSIINEISQASHEQSDGISQINLAVGQIDTTTQQN 486

Query: 484 SALVEESAAAAESLKGQADRLSTLVEFFQLGTTSLRAVRADESSAPMSVRAPRIA--PSV 541
           +ALVEESA+AA SL+ QA  L+  V  F+L            + AP  VR P       +
Sbjct: 487 AALVEESASAALSLQSQASLLAEAVSAFRL-------TPQGSNGAPSPVRQPAALSHARL 539

Query: 542 SAMPAIAAQKTGRRELDRDWATF 564
           +  P +  ++        DW +F
Sbjct: 540 AVRPGVTEKRAAAAGTHDDWTSF 562