Pairwise Alignments
Query, 2360 a.a., Polyketide synthase modules and related proteins from Variovorax sp. SCN45
Subject, 3470 a.a., non-ribosomal peptide synthetase from Pseudomonas putida KT2440
Score = 310 bits (795), Expect = 2e-87
Identities = 201/544 (36%), Positives = 290/544 (53%), Gaps = 22/544 (4%)
Query: 1434 ALQTPFVAPEGELANALAALWTERLGIAPIGMDDNLFELGGDSLVAIQLLSRIRKAYAVE 1493
A Q P+ AP L ALAA+W + L + +G+ D+ FELGG SL+A Q++ R+R+ A+E
Sbjct: 1005 AAQRPYQAPTSPLQQALAAIWADVLKVGQVGLSDSFFELGGHSLLASQMIGRVRQQLALE 1064
Query: 1494 LHPSEFFKAPTIAGLIARMPANGAPAEARQAAAMEMAPVPRTGALPLSPMQRRLWLVDRL 1553
+ F+A +AG R+ A A+ A VPR L LS Q+R W++ +L
Sbjct: 1065 VPLRSVFEAQDLAGFAERVAAATTGAQLPAIAV-----VPRGEPLALSYAQQRQWVLWQL 1119
Query: 1554 TDAGNVTGRAAYNMSAGLALHGELNVDVLRAAIDAIVARHEVLRTVFAEDDEGEPAAVIR 1613
AAYN+++ L L G L+V L+ A A+VARHE LRT F + D GE VI
Sbjct: 1120 EPHS-----AAYNIASALHLRGALDVAALQQAFQALVARHESLRTTFVQVD-GEARQVIH 1173
Query: 1614 DSVRLNIPLVEIDEADKPARERRYAMLFDELVRMPFALAEGPLIKATVVRLGEREHVLVL 1673
L +AD A E + + ++L R PF L GPLI+ ++RL + HVLV+
Sbjct: 1174 APEAQGACL---RQADVDAVELQATV--EQLAREPFDLVNGPLIRVDLLRLEAQAHVLVM 1228
Query: 1674 VVHHIVFDGWSIAVFARELGEFYERALRGQPLALAPLPVQYVDYAAWYDRALASETFAPK 1733
+HHI+ DGWS+AV EL Y+ GQ + L L VQY DYAAW + L + A +
Sbjct: 1229 NLHHIITDGWSMAVLVNELVALYQGYRHGQAVELPALAVQYADYAAWQRQWLEASEQARQ 1288
Query: 1734 AEFWRSYLRNAPQVSTLQSDHQRPATASHAGNSVVLELPPDLSQALAALARECDTSLFTL 1793
+W + L V L +D+ RPA S AG + L L L QAL A+ +LF L
Sbjct: 1289 LAYWEAQLGGEQPVLELPTDYPRPAQPSRAGGQLSLALDAPLVQALRRQAQAQGVTLFML 1348
Query: 1794 LLSSFFLFFHQASGADDIVIGTDVAGRGHPDLEQLLGFFVNVVPVRSRMSERQADFRQWL 1853
LL+SF H+ S DI +G VA R + E ++GFFVN V + F + L
Sbjct: 1349 LLASFQTLLHRYSTQPDIRVGVPVANRTRGETEGVVGFFVN-TQVHKAEFHLRLRFVELL 1407
Query: 1854 ARTKQQTLVAMDHQDVPFDQIVELSGAQRARDRNPLVQVLFVLQNTPEIRFA---IEGAE 1910
+ +Q L A HQD+PF+Q+V R ++NPL QV+F + E + A + G +
Sbjct: 1408 RQVRQTALDAQAHQDLPFEQLVAALKPDRILNQNPLFQVMF--NHQAEAKGAPREVPGLQ 1465
Query: 1911 VEVLPQQMNESKFDLAVFAREQAGALTVEWVYATDLYRRETVEKFTASWHALLERIVETP 1970
+E + Q++ ++FDLA+ E A +T + +AT+LY R+T+E+ W LL+ I
Sbjct: 1466 IEAVDWQVHSTQFDLALDTAEHADGMTAAFTFATELYDRQTIEQMARHWRNLLQAISRDA 1525
Query: 1971 GQAV 1974
Q V
Sbjct: 1526 NQVV 1529
Score = 239 bits (611), Expect = 5e-66
Identities = 147/441 (33%), Positives = 223/441 (50%), Gaps = 17/441 (3%)
Query: 1539 PLSPMQRRLWLVDRLTDAGNVTGRAAYNMSAGLALHGELNVDVLRAAIDAIVARHEVLRT 1598
P+S Q R W + +L A AYN+ A L L G L+++ LR A A++ RHEVLRT
Sbjct: 46 PVSYAQERQWFLWQLDPASG-----AYNIGAALQLQGRLDIEGLRGACQALIQRHEVLRT 100
Query: 1599 VFAEDDEGEPAAVIRDSVRLNI---PLVEIDEADKPARERRYAMLFDELVRMPFALAEGP 1655
+D + +I + + PL+ + RE + + PF L +GP
Sbjct: 101 TLRQDSD-RVVQIIHPQMPFELLIEPLIGMSATSDALREH-----VEACIAKPFDLEQGP 154
Query: 1656 LIKATVVRLGEREHVLVLVVHHIVFDGWSIAVFARELGEFYERALRGQPLALAPLPVQYV 1715
L++ ++ LGE +HVLVL VHHI DGWS+ + +L + YER +GQ L LPVQY
Sbjct: 155 LLRLNLLPLGEDDHVLVLTVHHIAADGWSMPILINDLVQCYERLSQGQAPNLPALPVQYA 214
Query: 1716 DYAAWYDRALASETFAPKAEFWRSYLRNAPQVSTLQSDHQRPATASHAGNSVVLELPPDL 1775
DYA W + + A + +W+ L V +L ++ RP S G V +E+ L
Sbjct: 215 DYAIWQRNWMEAGEQARQLAYWKDTLGGEQPVLSLPTNRSRPVAPSGRGARVGIEIDAVL 274
Query: 1776 SQALAALARECDTSLFTLLLSSFFLFFHQASGADDIVIGTDVAGRGHPDLEQLLGFFVNV 1835
Q+L ALA +LF LLL+SF H+ SG + +G +A R +++ L+GFFVN
Sbjct: 275 LQSLKALANAQGVTLFMLLLASFQTLLHRYSGQPQVRVGVPIANRNRSEVQGLIGFFVNT 334
Query: 1836 VPVRSRMSERQADFRQWLARTKQQTLVAMDHQDVPFDQIVELSGAQRARDRNPLVQVLF- 1894
+++ + + F L + K+ L A HQD+PF+Q+VE +R+ +PL QV+F
Sbjct: 335 QVLKADFA-LHSRFIDVLQQVKETALQAQAHQDLPFEQLVEALQPERSMSHSPLFQVMFN 393
Query: 1895 -VLQNTPEIRFAIEGAEVEVLPQQMNESKFDLAVFAREQAGALTVEWVYATDLYRRETVE 1953
Q + + G +V L ++FDL + RE A L YATDL+ +E
Sbjct: 394 HQAQAASDAHAQLSGLQVRGLEWDSRTTQFDLTLDTREHADGLFASLTYATDLFDVSRIE 453
Query: 1954 KFTASWHALLERIVETPGQAV 1974
+ W LL + + P + V
Sbjct: 454 QMARHWRNLLIQACQDPRKRV 474
Score = 168 bits (426), Expect = 1e-44
Identities = 172/642 (26%), Positives = 270/642 (42%), Gaps = 75/642 (11%)
Query: 1371 IGMDGPEGARTFERIVNGPLRPQTVISTTDLAQRLGP-----LDSGMLDMFETDDAQ--- 1422
+ DGP G + +V P+ + ++ QRL L G+ D
Sbjct: 1988 LAQDGPSGKQLVGYVV--PMAAEQAEPGSEAGQRLREQLAHFLGQGLPDYMVPAHLMLLA 2045
Query: 1423 --PAASGGSHPRPALQTP--------FVAPEGELANALAALWTERLGIAPIGMDDNLFEL 1472
P + G R L P +VAP L LA++W L + +GM DN F L
Sbjct: 2046 NLPVTANGKLARNLLPAPDFNAARQVYVAPRTALEQQLASIWETVLNLPQVGMQDNFFAL 2105
Query: 1473 GGDSLVAIQLLSRIRKAYAVELHPSEFFKAPTIAGLIAR-----------MPANGAPAEA 1521
GGDS++AIQ++S+ R+ +++ P + F TI L AR + + +
Sbjct: 2106 GGDSIIAIQVVSQARQ-LGLDIAPRDLFLLQTIEQLAARVGQWQMVEQQSVALHSLTEQQ 2164
Query: 1522 RQAAAMEMAPVPRTGALPLSPMQRRLWLVDRLTDAGNVTGR---AAYNMSAGLALHGELN 1578
QA +E A V G LSPMQ+ + + ++ GR Y + + G L
Sbjct: 2165 VQALPLEHAGV--DGLYSLSPMQQGMLFL-------SLNGRPEDQLYINQLSVPVQG-LV 2214
Query: 1579 VDVLRAAIDAIVARHEVLRTVFAEDDEGEPAAVIRDSVRLNIPLVEIDEADKPARERRYA 1638
+ LR A + +VARH+VLRT F D EP + +L +PL E+D + +
Sbjct: 2215 AERLRQAWETVVARHDVLRTGFLWQDLDEPLQYVMG--QLPLPLRELDWRGRGDCAQALE 2272
Query: 1639 MLFDELVRMPFALAEGPLIKATVVRLGEREHVLVLVVHHIVFDGWSIAVFARELGEFYER 1698
L +E F LA PL + +VRL ++ H L+ HHI+ DGWS + E+ Y
Sbjct: 2273 ALANEERERGFDLARPPLQRMLLVRLDDQRHQLIWTYHHILLDGWSTSQLMGEVLACYS- 2331
Query: 1699 ALRGQPLALAPLPVQYVDYAAWYDRALASETFAPKAEFWRSYLRNAPQVSTLQSDHQRPA 1758
GQ L V Y +Y W L + FW+ L + Q T +D
Sbjct: 2332 ---GQTLDSV---VPYRNYIGW----LRQQDPRHSETFWKQQLASL-QEPTYLADAFASG 2380
Query: 1759 TASHAGNSVVLELPPDLSQALAALARECDTSLFTLLLSSFFLFFHQASGADDIVIGTDVA 1818
++ ++ A A+ +L T++ ++ L + SG + G VA
Sbjct: 2381 ERGSGHQALYSRFSVAQTETFKAFAQSQRITLNTVVQGAWLLLLSRYSGQRSVSFGATVA 2440
Query: 1819 GR--GHPDLEQLLGFFVNVVPVRSRMSERQADFRQWLARTKQQTLVAMDHQDVPFDQIVE 1876
GR P ++ +LG F+N +PV + + QA QWL + ++ L DH+ +I
Sbjct: 2441 GRPAALPGVQSMLGLFINTLPVIHEV-DPQAQVGQWLQQLQRINLELRDHEYTALGEIQR 2499
Query: 1877 LSGAQRARDRNPLVQVLFVLQNTPEIRFAIEGAE-----VEVLPQQMNESKFDLAVFARE 1931
+G R PL + V +N P R E + +V + + DL V +
Sbjct: 2500 WAG----RSGQPLFDSIIVFENQPLDRTLREWKDDSLQFGDVGGSGLTDFPMDLMVIVED 2555
Query: 1932 QAGALTVEWVYATDLYRRETVEKFTASWHALLERIVETPGQA 1973
Q L +E++Y + E V A+ ALL+ + GQA
Sbjct: 2556 Q---LIIEYMYLRQCFSEEAVAGIRANMEALLQAL-SLDGQA 2593
Score = 56.2 bits (134), Expect = 9e-11
Identities = 47/168 (27%), Positives = 75/168 (44%), Gaps = 12/168 (7%)
Query: 1374 DGPEGARTFERIVNGPLRPQTVISTTDLAQRLGP-----LDSGMLDMFETDDAQPAASGG 1428
DGP G + F + Q + L +RL + L + E P
Sbjct: 3051 DGPSGKQLFGYVTLAEGHAQGIAE--QLRERLKQELPEYMVPAQLMVLERMPLSPNGKLD 3108
Query: 1429 SHPRPALQT--PFVAPEGELANALAALWTERLGIAPIGMDDNLFELGGDSLVAIQLLSRI 1486
+ PA+Q VAP EL A+A +W + L + +G+ DN FELGGDS++++Q++++
Sbjct: 3109 RNALPAMQALREHVAPRNELELAIARIWQDVLKVEQVGITDNFFELGGDSILSMQVVAKA 3168
Query: 1487 R--KAYAVELHPSEFFKAPTIAGLIARMPANGAPAEARQAAAMEMAPV 1532
R K L + + TIA L A + +P + A AP+
Sbjct: 3169 RGLKKIGFTLRLRDLIQKSTIAELTA-VAGKHSPLLSLNAPVAGQAPM 3215