Pairwise Alignments

Query, 355 a.a., Probable transmembrane sensor from Variovorax sp. SCN45

Subject, 381 a.a., hypothetical protein from Variovorax sp. SCN45

 Score =  116 bits (291), Expect = 8e-31
 Identities = 108/347 (31%), Positives = 147/347 (42%), Gaps = 44/347 (12%)

Query: 32  ARMAMNQWRSRSPEHAAALLEARHRWDALGGMAGD----LRAHFDDPAAGMAAA------ 81
           A     QW +  P H     E     D +  + GD    LRA   + A    AA      
Sbjct: 50  AEAEFQQWLAADPVHGELYDELDGSLDGVRLLPGDSIQSLRATVQEDARARVAAVPPRRA 109

Query: 82  ---AATESGRRSQRRKMLLSIAGL-----LGGGLVAGRGMQW----YWQ-QPVFHAAYNT 128
              A+  S     RR  LL +  L     L G  VA  G  W    +W+ QP+F   Y T
Sbjct: 110 PSPASRGSPASPGRRNWLLDLGRLVPQAALAGTAVAVVGGGWLGWAHWRGQPIFEKHYAT 169

Query: 129 RTAQMLKVSLADGAGDAPGSQLDIAPQSAIDVTLYRQRRVVEMARGEVRFEVAHDARRPF 188
              Q L + L DG+      QLD A Q+   V LY   R V +  G+  F V+ +A +PF
Sbjct: 170 ARGQSLNIDLPDGSA----LQLDAATQA--QVRLYHDHREVRLLDGQAMFIVSSNAAQPF 223

Query: 189 QVRTRGAVIEVVGTVFTVRDR-----GGPITVGVEQGHVRVQVRARQDGGAPYANATEVI 243
            V      + VVGT F+VR        G  TV VE G VRV   A  +G          +
Sbjct: 224 HVLAGETRVVVVGTRFSVRHTRSGIDAGKTTVAVESGRVRVSALASVEGAG--------V 275

Query: 244 DLRRGELIEVRD-GHADAVRQSDTRALSAWRDGWLVFDNTPLGEALAVVNSYRASPIVGA 302
           +L  G+ +   D G    V +     ++AWR G + F +TPL +ALA    Y  + +V  
Sbjct: 276 ELTAGQGVTADDAGRLAPVVEIAAGGVAAWRQGRVSFTDTPLAQALAEFERYGDTGLVVR 335

Query: 303 NARIDALRLSGRFRSNDSVALVALLPTILPVTAVSRPDGSVELQAWP 349
           +  + ALRL G F   +       LP +LPV  + R  G+ E+ A P
Sbjct: 336 DPAVGALRLGGSFSLRELGTFAQALPVLLPV-RLERRGGATEVVALP 381