Pairwise Alignments

Query, 355 a.a., Probable transmembrane sensor from Variovorax sp. SCN45

Subject, 335 a.a., putative Transmembrane sensor from Pseudomonas putida KT2440

 Score = 91.3 bits (225), Expect = 3e-23
 Identities = 93/326 (28%), Positives = 131/326 (40%), Gaps = 36/326 (11%)

Query: 27  EAAQHARMAMNQWRSRSPEHAA---ALLEARHRWDALGGMAGDLRAHFDDPAAGMAAAAA 83
           +  Q  R A   W +  P HA    A+LE     D L   A  +   F+ PA   A    
Sbjct: 29  DCTQAEREAFADWLAADPRHAEEYQAMLEIWQTADLLPRSATVI--DFNPPARHAA---- 82

Query: 84  TESGRRSQRRKMLLSIAGLLGGGLVAGRGMQWYWQQPVFHAAYNTRTAQMLKVSLADGAG 143
                R +  + L S A +    L     M W       H  +     +M  V L+DG  
Sbjct: 83  -----RPRNWRPLASAAAIALAVLPLAGWMGWEQGWLPNHYQHFEAGDRMQTVELSDG-- 135

Query: 144 DAPGSQLDIAPQSAIDVTLYRQRRVVEMARGEVRFEVAHDARRPFQVRTRGAVIEVVGTV 203
               S + +   + +    Y+ +R V + RGE  F+V HD+  PF VR       V GT 
Sbjct: 136 ----STVQLNLHTELTFLNYKDQRQVTLKRGEAFFKVRHDSSHPFIVRAGSGQTRVTGTQ 191

Query: 204 FTVRDRGGPITVGVEQGHVRVQVRARQDGGAPYANATEVIDLRRGELIEVRDGHAD---A 260
           F V      + V + +G V V       G             R G  ++      D    
Sbjct: 192 FNVWKYQDQVKVTLVEGSVLVSSEGSAGG------------YRLGPGMQASYHKGDFEPQ 239

Query: 261 VRQSDTRALS-AWRDGWLVFDNTPLGEALAVVNSYRASPIVGANARIDALRLSGRFRSND 319
           + QSD    S AWR G LV DN  L +AL V+N Y  +P++ A+A    +R+SG + + +
Sbjct: 240 LEQSDDYGNSLAWRSGKLVLDNLSLEQALPVINRYLDAPLLLADASTGRIRISGIYNTRE 299

Query: 320 SVALVALLPTILPVTAVSRPDGSVEL 345
              LV  LP +LPV      DGS  L
Sbjct: 300 VGRLVNNLPKVLPVYLTRSKDGSTVL 325