Pairwise Alignments

Query, 355 a.a., Probable transmembrane sensor from Variovorax sp. SCN45

Subject, 351 a.a., putative Transmembrane sensor from Pseudomonas putida KT2440

 Score = 75.1 bits (183), Expect = 3e-18
 Identities = 85/325 (26%), Positives = 130/325 (40%), Gaps = 37/325 (11%)

Query: 7   RERLIERALALIVEGEIAPGEAAQHARMAMNQWRSRSPEHAAALLEARHRWDALGGMAGD 66
           R R ++ AL  +V  + A     Q    A   W S +PE+A A +EA   W+  G     
Sbjct: 48  RARAMDEALDWLVRLQCADAADTQ----AFEAWLSAAPENAEAYVEAEALWN--GTPLHK 101

Query: 67  LRAHFDDPAAGMAAAAATESGRRSQRRKMLLSIAGLLGGGLVAGRGMQWYWQQPV-FHAA 125
           +  H             +  GR     K L + A LL G    G         P+   A 
Sbjct: 102 VATHMHQQQR------RSWRGRLRSHWKPLATAALLLVGLFTVGN-------LPMRLQAD 148

Query: 126 YNTRTAQMLKVSLADGAGDAPGSQLDIAPQSAIDVTLYRQRRVVEMARGEVRFEVAHDAR 185
           + T   +  ++ L DGA      ++ +   SA        R+V  + +GE  F+V   A+
Sbjct: 149 HLTVVGERQRLQLEDGA------KVLLNTNSAFASERQDGRQVARLLQGEAYFQVPEGAQ 202

Query: 186 RPFQVRTRGAVIEVVGTVFTVRDRGGPITVGVEQGHVRVQVRARQDGGAPYANATEVIDL 245
            P +V       +V  T F VR   G   V V++G V +Q    Q            I L
Sbjct: 203 LPLEVEAGPLRAQVRDTDFAVRYLDGEAQVRVQRGDVDLQGERDQR-----------IRL 251

Query: 246 RRGELIEVRDGHADAVRQSDTRALSAWRDGWLVFDNTPLGEALAVVNSYRASPIVGANAR 305
             G+ I V        ++ D     AW DG LVF+N PL + LA V  Y    I+  NA+
Sbjct: 252 SAGDSISVGPQGFGQRQRPDMHKDLAWIDGRLVFENCPLSQVLAEVQRYYPGWIINRNAQ 311

Query: 306 IDALRLSGRFRSNDSVALVALLPTI 330
           ++ + ++G +R +  +  +  L  I
Sbjct: 312 LEHVAVTGNYRLDQPLETLRALAHI 336