Pairwise Alignments

Query, 355 a.a., Probable transmembrane sensor from Variovorax sp. SCN45

Subject, 321 a.a., putative Transmembrane sensor from Pseudomonas putida KT2440

 Score = 81.3 bits (199), Expect = 3e-20
 Identities = 84/316 (26%), Positives = 132/316 (41%), Gaps = 39/316 (12%)

Query: 39  WRSRSPEHAAA---LLEARHRWDALGGMAGDLRAHFDDPAAGMAAAAATESGRRSQRRKM 95
           W +    H  A   +     R+  L G A   R  FD          +    R S+R  +
Sbjct: 37  WLNEDTRHRLAWSYVENINQRFGGLSGQAEQARQVFD----------SVRRDRHSRRAVL 86

Query: 96  ----LLSIAGLLGGGLVAGRGMQWYWQQPVFHAAYNTRTAQMLKVSLADGAGDAPGSQLD 151
               +  +AG+LG G   G    W      + A Y T   ++  V+LADG      SQL 
Sbjct: 87  GSLCVAGVAGVLGWG---GWQRGWVDSPRAWFATYRTGLGEVRPVTLADG------SQLW 137

Query: 152 IAPQSAIDVTLYRQRRVVEMARGEVRFEVAHDARRPFQVRTRGAVIEVVGTVFTVRDRGG 211
           +   +A+DV      R + + RGE+  E   D R P  V TR   ++ +GT F+VRD+G 
Sbjct: 138 LNGGTALDVQFDEGSRQLRLYRGEILIESGKDPR-PLSVVTRAGRVQPLGTRFSVRDQGL 196

Query: 212 PITVGVEQGHVRVQVRARQDGGAPYANATEVIDLRRGELIEVRDGHADAVRQSDTRALSA 271
             T+ V  G V+          A  + +     L+ G+++ V D        +  R    
Sbjct: 197 QTTLSVFAGAVQ----------ATCSGSGRQTTLQAGQMM-VFDAQQVGAPSTAQRLRED 245

Query: 272 WRDGWLVFDNTPLGEALAVVNSYRASPIVGANARIDALRLSGRFRSNDSVALVALLPTIL 331
           W  G LV ++ PL + + ++  YR   + G +  I +LR  G F   D+   +A+L   L
Sbjct: 246 WSRGVLVAEDMPLVQMIDILRDYRHGHL-GIDPAIGSLRAVGTFPLLDTDRALAMLERAL 304

Query: 332 PVTAVSRPDGSVELQA 347
           P+  V      V ++A
Sbjct: 305 PIRVVRTLPWWVSIEA 320