Pairwise Alignments

Query, 355 a.a., Probable transmembrane sensor from Variovorax sp. SCN45

Subject, 318 a.a., putative Transmembrane sensor protein from Pseudomonas putida KT2440

 Score = 97.4 bits (241), Expect = 4e-25
 Identities = 95/333 (28%), Positives = 146/333 (43%), Gaps = 50/333 (15%)

Query: 13  RALALIVEGEIAPGEAA--QHARMAMNQWRSRSPEHAAALLEARHRWDALGGMAGDLRAH 70
           R L   +  +++ GE++     R    +W + S EHA A       W  LG M   + A 
Sbjct: 9   RVLEAAIAWKLSLGESSGTPDERNEFMRWHAASEEHARA-------WRQLGAMDQRVSA- 60

Query: 71  FDDPAAGMAAAAATESGRRSQRRKMLLSIAGLLGGGLVAGRGMQW---------YWQQPV 121
               AAG A  A  +S  R+  R+ +  + G L G  + G  + W         YW    
Sbjct: 61  ----AAGPARQALLQS--RASLRRRIGKVGGGLAGTFLLGALLAWVGAPSLAPSYWL--- 111

Query: 122 FHAAYNTRTAQMLKVSLADGAGDAPGSQLDIAPQSAIDVTLYRQRRVVEMARGEVRFEVA 181
             A   T T ++  + L DG      + L +   +A+D+     +RV+ + +GE+  E  
Sbjct: 112 --ADQRTATGELRTLRLEDG------TLLSLNTHTAVDIEYAGAQRVIVLHQGEISVETG 163

Query: 182 HDARRPFQVRTRGAVIEVVGTVFTVRDRGGPITVGVEQGHVRVQVRARQDGGAPYANATE 241
           H   RP  VRT    +  +GT F VR          E G  R++V        P+ +  E
Sbjct: 164 HQDPRPLLVRTEDGRLRPLGTRFLVRR---------EAGGTRLEVLQASVAAMPHDSGDE 214

Query: 242 VIDLRRGELIEVRDGHADAVRQSDTRALSAWRDGWLVFDNTPLGEALAVVNSYRASPIVG 301
            + LR G+ + +       V      A  AW  G LV DN  LG+ LA +  YR S  +G
Sbjct: 215 QV-LREGQQVLMNANGLGEVGTVPAGA-DAWTRGMLVVDNVRLGDLLATLGQYR-SGYLG 271

Query: 302 ANARIDALRLSGRF-RSNDSVALVALLPTILPV 333
            +A++  LR++G F  +N  +AL +L+P  LPV
Sbjct: 272 VDAKVADLRVTGSFPLTNTDLALASLVPA-LPV 303