Pairwise Alignments

Query, 355 a.a., Probable transmembrane sensor from Variovorax sp. SCN45

Subject, 318 a.a., putative transmembrane sensor from Pseudomonas putida KT2440

 Score = 80.9 bits (198), Expect = 4e-20
 Identities = 93/337 (27%), Positives = 142/337 (42%), Gaps = 39/337 (11%)

Query: 1   MAMSAPRERLIERALALIVEGEIAPGEAAQHARMAMNQWRSRSPEHAAALLEARHRWDAL 60
           M ++ P  + + +A+  ++    +  + A   + A  QWRS   E+  A     H    L
Sbjct: 1   MTVARPDTKTVRQAIQWMLRLRESGHDPALQQQCA--QWRSSHHENEQAWQRMVHLHKDL 58

Query: 61  GGMAGDLRAHFDDPAAGMAAAAATESGRRSQRRKMLLSIAGLLGGGLVAGRGMQWYWQQ- 119
                DLRA    P AG+A      S +R +RR+ L     LLGG ++AG    W  +  
Sbjct: 59  -----DLRAI---PGAGLALQTLETSQQRLRRRQALK----LLGGVVMAGSA-SWLAKDL 105

Query: 120 ---PVFHAAYNTRTAQMLKVSLADGAGDAPGSQLDIAPQSAIDVTLYRQRRVVEMARGEV 176
                + + Y T T +    +L DG      S + +   SA+D+  + Q+R+V +  GE+
Sbjct: 106 DTVSAWTSDYATGTGERRVFTLPDG------SLMQLNTCSAVDLAFHDQQRLVRLKLGEL 159

Query: 177 RFEVAHDARRPFQVRTRGAVIEVVGTVFTVRDRGGPITVGVEQGHVRVQVRARQDGGAPY 236
                 + R P  V TR A++E     F          V V  G V +          P 
Sbjct: 160 MINC--NPRHPLLVETRDALLEGFEGRFVAYQDSDCTRVSVSHGKVAIH--------RPG 209

Query: 237 ANATEVIDLRRGELIEVRDGHADAVRQSDTRALSAWRDGWLVFDNTPLGEALAVVNSYRA 296
           A   + I+  +   ++ +  H  A    D  A   W +G +V  +  L   LA V+ YR 
Sbjct: 210 AGQLQWIEGGQNWRLDAQGAHRLAHMDMDAMA---WTEGLIVTQDMRLSNFLAQVSRYRH 266

Query: 297 SPIVGANARIDALRLSGRFRSNDSVALVALLPTILPV 333
              +G +  I  LRLSG FR  D   L+ LLP  LPV
Sbjct: 267 G-YLGCSNEIADLRLSGVFRLEDPEQLLRLLPQTLPV 302