Pairwise Alignments

Query, 240 a.a., Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1) from Variovorax sp. SCN45

Subject, 231 a.a., ABC transporter from Pseudomonas simiae WCS417

 Score =  152 bits (384), Expect = 5e-42
 Identities = 81/221 (36%), Positives = 130/221 (58%), Gaps = 3/221 (1%)

Query: 13  YGSADEIVKGIDLEVRARDLAVIIGPNGAGKSTFLKLVAGLLKPKTGHVQIDGRHLLSGS 72
           Y     +++G+ L V   +L  ++G NGAGK+T L+ + G++ P+ G +  +G+ L+   
Sbjct: 10  YYDKSHVLEGVSLTVNPGELVTLLGRNGAGKTTTLRSILGIICPRKGQIHFNGQALVGQK 69

Query: 73  AQEACAQGLSFVPQERNVFQSLTVRENLEMGGYLVRAQARSRIEAQLERFPLLKPRLKHK 132
             E   QGL+ VP+ R +F+ LTV ENL +     R  +R ++E     FP LK R K+ 
Sbjct: 70  IFEIARQGLALVPENRGIFRLLTVEENLRIA---TRKTSRWQLEDVYGMFPRLKERRKNA 126

Query: 133 AGNLSGGQRQVLAMAIALMTQPTVLLLDEPTAGLSPAAADEVFDLIRELAAQGLAILMVE 192
              LSGG++Q+LA+A AL+  P +L+LDEPT GL+P   DE+  ++R++   GL +L+VE
Sbjct: 127 GHALSGGEQQMLAIARALLNDPKLLILDEPTEGLAPVIVDELVKILRKVKDDGLPVLLVE 186

Query: 193 QNALLALEYGTRGIVLVAGRKLRDTKASELLADDEIRHLFL 233
           QN ++  +   R  VL  GR + +  A    AD  I++ +L
Sbjct: 187 QNLMVCDKLADRHYVLEQGRVVYEGSAEAFRADPTIKNRYL 227