Pairwise Alignments

Query, 240 a.a., Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1) from Variovorax sp. SCN45

Subject, 238 a.a., high-affinity branched-chain amino acid transporter, ATP-binding from Pseudomonas putida KT2440

 Score =  152 bits (383), Expect = 7e-42
 Identities = 86/233 (36%), Positives = 135/233 (57%), Gaps = 2/233 (0%)

Query: 4   LNVRDIRGGYGSADEIVKGIDLEVRARDLAVIIGPNGAGKSTFLKLVAGLLKPKTGHVQI 63
           L ++D+   YG   + +K + + +   +   +IG NGAGKST L  + G  +  +GH+  
Sbjct: 6   LELKDLDVFYGPI-QALKKVSMHINEGETVSLIGANGAGKSTLLMSIFGQPRAASGHIVY 64

Query: 64  DGRHLLSGSAQEACAQGLSFVPQERNVFQSLTVRENLEMGGYLVRAQ-ARSRIEAQLERF 122
            G  +   S+    + G++  P+ R VF  +TV ENL MG   +  + A   ++   E F
Sbjct: 65  RGTDITRKSSHYIASNGIAQSPEGRRVFPDMTVEENLMMGTIPIGDKHADEDMQRMYELF 124

Query: 123 PLLKPRLKHKAGNLSGGQRQVLAMAIALMTQPTVLLLDEPTAGLSPAAADEVFDLIRELA 182
           P LK R   +A  +SGG++Q+LA+A ALM++P +LLLDEP+ GL+P    ++F  +RELA
Sbjct: 125 PRLKERRNQRAMTMSGGEQQMLAIARALMSRPKLLLLDEPSLGLAPIVVKQIFSTLRELA 184

Query: 183 AQGLAILMVEQNALLALEYGTRGIVLVAGRKLRDTKASELLADDEIRHLFLGG 235
             G+ I +VEQNA  AL+   R  V+V G+        ELL ++E+R+ +LGG
Sbjct: 185 KTGMTIFLVEQNANHALKLSDRAYVMVNGQIRMTGTGQELLVNEEVRNAYLGG 237