Pairwise Alignments

Query, 399 a.a., no description from Variovorax sp. SCN45

Subject, 378 a.a., branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein (braC-like) from Pseudomonas putida KT2440

 Score =  100 bits (248), Expect = 9e-26
 Identities = 81/320 (25%), Positives = 142/320 (44%), Gaps = 13/320 (4%)

Query: 4   RRSFLSTGAAVALGVAHPVLWAQNKEPIRIGILIPLTGATSQFGATMSRAAQIAAEEVNA 63
           ++ FL+   A ALGV+  V     +  ++IG+  P+TGA + FG    + AQ AA+++NA
Sbjct: 7   KKGFLALAVATALGVSSYV-----QADVKIGVAGPMTGANAAFGEQYMKGAQAAADKINA 61

Query: 64  AGGVNGRRLEVVIEDDQSNPEAAVRAARKLIDVDRVVAIGGSYASSVTSAIAPLCWESKT 123
           AGGVNG ++ +V  DD   P+ AV  A +L+D D+V+ + G + SS T   + +  E+  
Sbjct: 62  AGGVNGEKIVLVKGDDACEPKQAVAVANRLVDQDKVIGVVGHFCSSNTIPASEVYDEAGV 121

Query: 124 VLATSSGADSITKLPHQGYVFRTSPTVTLQGTRVGDLGIE-LGCRKMFFMGPQTPFAQSY 182
           +  T    +          +FR       QG   GD  ++ L  +K+  +  +  + Q  
Sbjct: 122 IAITPGSTNPQVTERGLSAMFRMCGRDDQQGIVAGDYIVDVLKGKKVAVLHDKDTYGQGL 181

Query: 183 IDIISGIFTRAGGAGAGLIYED---KKSSYRSEVDQALRTRPDVIVLGGYVPDTSVVLKD 239
            D       + G     ++YE     +  + + V +   T  DV+  GG  P+   +++ 
Sbjct: 182 ADATKAQLEKRG--VKPVLYEGLTRGEKDFSAVVTKIRSTGADVVYFGGLHPEAGPLVRQ 239

Query: 240 LYRAGYDGKRIGFSFGI--NQKLVEAVPAEVAEGAYSLVPSASVTAGAYKRLVARMKLEA 297
           L   G    +     GI  ++ +  A  A+  +G Y    +        K +V   +   
Sbjct: 240 LREQGLKDVKFMSDDGIVTDELVSTAGGAQYVDGVYMTFGADPRLLPDSKAVVEEFRKAG 299

Query: 298 LDSYSCQVYDHVMLVALALA 317
            +     +Y +  L ALA A
Sbjct: 300 TEPEGYTLYAYASLQALAAA 319