Pairwise Alignments

Query, 295 a.a., Branched-chain amino acid ABC transporter, permease protein LivH (TC 3.A.1.4.1) from Variovorax sp. SCN45

Subject, 304 a.a., branched-chain amino acid ABC transporter permease from Magnetospirillum magneticum AMB-1

 Score =  129 bits (324), Expect = 8e-35
 Identities = 96/297 (32%), Positives = 150/297 (50%), Gaps = 22/297 (7%)

Query: 6   VQHLVNGLVMGAVVALPALGLTLIFSVLGFINFSIAAQMTVGAY--------GGWLVNTH 57
           +Q L+NGL +GA+  L ALG T+++ VLG INF+      VGA+           ++ T 
Sbjct: 5   LQQLINGLTLGAIYGLVALGYTMVYGVLGMINFAHGTIYMVGAFISLITFLVATTVLGTS 64

Query: 58  LHWPLVPVLVAAFALAGLVGVVGDRLALVPMRRKISAHTPLMVAIVS-IALNLALENALR 116
           +   LV  LVAA AL  L G   +R+A  P+R       P +  ++S I +++ L+N + 
Sbjct: 65  VPLALVLTLVAAMALTALWGWTAERVAYRPLRS-----APRLAPLISAIGVSIMLQNFVA 119

Query: 117 FGFGSDLNSFEMPIAR------DVQFAGIRVGPQQVHNLGIALAIAVVLAAFFTVTRVGK 170
              G+       P+ R      D     + +   Q+  + + LA+  V     T T +G+
Sbjct: 120 QAQGARAKPLP-PVFRGGITLMDSGDFVVSLSWMQMVIMALTLALMAVFTWVITRTALGR 178

Query: 171 AMRAVADNADLARLKGIDPTRLSNLATFIGMGLAGIGGALLAIDTSV-DPSTGSRLLLII 229
           A RA   +  +A L GID  R+ +    IG GLAG+ G ++ +   V D   G    +  
Sbjct: 179 AQRACEQDMKMASLLGIDVDRVISTTFVIGAGLAGVAGMMVTLYYGVIDFYIGFLAGIKA 238

Query: 230 FSASVLGGLTSLTGAVLGALLIGMVSEVSLLVISPVYQSATAFAAILLVLLIRPSGL 286
           F+A+VLGG+ SL GA+LG LLIG++        S  Y+    F+ ++ VL+ RP+GL
Sbjct: 239 FTAAVLGGIGSLPGAMLGGLLIGLIEAFWSAYFSIEYKDVATFSILVAVLVFRPTGL 295