Pairwise Alignments

Query, 339 a.a., Acyl-CoA dehydrogenase/oxidase domain protein from Variovorax sp. SCN45

Subject, 332 a.a., acyl-CoA dehydrogenase from Pseudomonas simiae WCS417

 Score =  341 bits (874), Expect = 2e-98
 Identities = 168/309 (54%), Positives = 214/309 (69%), Gaps = 3/309 (0%)

Query: 17  HGRDLALKHLVDAGIDVLPRPGGGQTLARWRVLAAVAAHDLSLVKLFEGHTDALAILAEL 76
           H    ALK L + G+D LP PG GQTL R+  LA VA HDL L KLFEGHTDALAI+AEL
Sbjct: 17  HALGAALKALQEEGLDQLPLPGSGQTLERFSRLAQVAGHDLRLCKLFEGHTDALAIMAEL 76

Query: 77  GGAPAVPMGVRWGTWCAEPPDARVVFEKGDAGRDIRLNGTKAWCSGAASVTHAVVSGWNT 136
             + + P+G  WG W AEPP A+V   K   G  +++ G KAWCSGAA V+H +++ W+ 
Sbjct: 77  NSS-SPPLGSTWGMWAAEPPTAKVRVFKD--GHRLKVQGRKAWCSGAAVVSHGLLTAWDE 133

Query: 137 EGEPCLAAVAMDQPSVRVTNEGWHAVGMAGSASVDVRFDSARAVQIGQPGDYTRRPGFWQ 196
           E    L AVAMDQP + V++EGW+AVGMA + SVDV FD A  + +G PGDY  RPGFWQ
Sbjct: 134 EDRQQLVAVAMDQPGIIVSDEGWNAVGMAATGSVDVVFDEAWGIAVGGPGDYLARPGFWQ 193

Query: 197 GGAGIAACWFGGALGIARRVRESTGPKADAHRLAHLGAIEVALGAAASLLRESAAWIDRH 256
           GG GIAACW+G A  +A  +R+    + + H LAHLGA++ AL +AA +LR SA  +D  
Sbjct: 194 GGIGIAACWYGAAQRLAEVLRDQCSKRPEPHALAHLGAVDSALNSAACVLRASAERVDHA 253

Query: 257 PQGNAQRVAMRVRLAVEQAAQEVMHHAGRAVGAGPLCREPRFAHAMADLPVFLRQSHAER 316
           P+ NA+  A + R  +E   ++VM H GRAVGAGP C++P FA  MADLPV++RQSHAER
Sbjct: 254 PKANARMWAQQTRACIEDTVEQVMRHVGRAVGAGPYCKDPHFAQLMADLPVYVRQSHAER 313

Query: 317 DLAALGQLV 325
           DLA+LG+ V
Sbjct: 314 DLASLGECV 322