Pairwise Alignments

Query, 523 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 518 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  511 bits (1317), Expect = e-149
 Identities = 265/504 (52%), Positives = 342/504 (67%), Gaps = 4/504 (0%)

Query: 16  LAASGAFAQTSVTVAQPADIRSTNPGVNRDNTTDGVVLNIVEGLVGYRMDGSVGPLLAQS 75
           L A  A A+T++ V   ADIRST PGVNRD  TD V+L+IVEGLV +R D SVGPLLA+ 
Sbjct: 15  LGAGLAQAETALRVGLNADIRSTEPGVNRDENTDTVMLHIVEGLVAHREDASVGPLLARE 74

Query: 76  VDVSADGLTYTFKLRKGVKFHNDAPLTSADVAWNWKRYMDPKTDWRCTSEYDGRNGLKVV 135
           V  S DG+TYTF LR  V F N A LT+ DV W W+RY++PKT WRC +E+DGR G K+ 
Sbjct: 75  VKRSDDGMTYTFTLRDRVHFQNGATLTAQDVKWTWERYLNPKTQWRCLAEFDGRGGAKIT 134

Query: 136 ETATPDAGTFVMKINKPSAVFLDTLARTDCGMTAILHKSSLKADGSWDKPVGTGPFKFGE 195
              TPD  T V  +++PS +FL ++AR DCG + ILH  SL ADGSW  P+GTGPF  GE
Sbjct: 135 GIDTPDPLTVVFHLDQPSGLFLASMARPDCGGSGILHPDSLAADGSWKAPIGTGPFSLGE 194

Query: 196 WKRGEYVTLTAFKGYTSTPGATKSDGYIGLKAPLVDSVKFLVVPDAATAAAGLKSGAID- 254
           WK G+YV L+ FK Y+    A   DG+ G K  LVD+V+F+V+PD ++A A L S  ID 
Sbjct: 195 WKPGQYVVLSRFKDYSPRDDA-GPDGFTGKKTALVDAVRFMVIPDPSSAKAALMSNNIDL 253

Query: 255 AGQITSSDAQELKNDRNLAVQAPPEAIKNVLLIQTRDPLLKNQKLRQAIAASLDIEQIVA 314
              +++SDAQELK+   + +   P      LL QT DPLLK+ ++RQAIA SLD  Q+V 
Sbjct: 254 LPNVSASDAQELKSTPGVQISFSPIMAICGLLFQTNDPLLKDVRIRQAIAHSLDYGQMVT 313

Query: 315 AASEGLGSVNNSAIHKGSAFYSAAQKKGWHYDPAQAAKLLREAGYKGEKITIQTNKRAHV 374
           A S G    NNSAI + S FYSA  K+G+ YDP +A +LL+EAGY G+ I +  NKR + 
Sbjct: 314 ALSNGTSEPNNSAIPQTSPFYSATAKQGYRYDPQEAQRLLKEAGYHGQPIKMIVNKR-YS 372

Query: 375 PSYTVAVLAQAMMQSVGINAQLEVLEWATQLDRYNSGNYQISSFSYSSRLDPALSYEQFS 434
             + + +L+QAM  + G+N Q+E LEW TQL+RY SGNYQ+ +FSYSSRLDPA S++   
Sbjct: 373 QMFDMGLLSQAMAVASGLNIQMETLEWGTQLERYQSGNYQMMAFSYSSRLDPATSFDSLM 432

Query: 435 GPKDKQSRKVWEDPQALKLIDDSFAESDPKKRQALFDQIHGLMIQQVPMVMLFNGIDAWA 494
           G K K+ RKVW++PQA  ++ D+  ESD  KRQALFDQ+H +MI   PMV+++NG  A A
Sbjct: 433 GDKTKEPRKVWDNPQAQAVLRDAVRESDTAKRQALFDQLHTMMIHDTPMVIIYNGTVAAA 492

Query: 495 VRKRVSGFAVWE-GKPRLWGVSVA 517
           +R  V GF  W    PRLWGVS+A
Sbjct: 493 LRDSVKGFHSWPVSSPRLWGVSLA 516