Pairwise Alignments

Query, 662 a.a., Two-component system sensor histidine kinase/response regulator hybrid from Variovorax sp. SCN45

Subject, 1204 a.a., histidine kinase from Pseudomonas simiae WCS417

 Score =  164 bits (415), Expect = 2e-44
 Identities = 157/559 (28%), Positives = 243/559 (43%), Gaps = 57/559 (10%)

Query: 129  LQALIRARMAEEKQRNSEARFRAIY-DHAPTGIALIDAQGCFADVNPALVAMLGQSREVL 187
            L+ LI  R   E+  + + RF ++  D  P  I + D QG     N A + + G   E +
Sbjct: 559  LRNLIHKRAQAEQALSDQMRFMSVLIDGTPHPIYVRDRQGRLMACNNAYLDVFGFKLEDV 618

Query: 188  VGQPVSAFAPDEWTAFVKTHTQGVQPPSAPWTGEF-------------PLLRLDGSWIRL 234
            +G+ V           V+T T G  P +  +  ++              +L++ G  +  
Sbjct: 619  IGKTV-----------VQTDT-GNPPQAQSFHADYLSLMERGEPQIQDRVLKVPGGGVLT 666

Query: 235  --EWTMSGHIEPGLRVGIA---LDVSERFELEARRREVLEREQAARVAAERLSRTKDDFV 289
              +W +      G  VG+    +DVSER  L  + +E  E   AA       +R K  F+
Sbjct: 667  IYQWMLPYRDSNGAVVGMIAGWVDVSERQRLLGQLQEAKEEADAA-------NRAKTTFL 719

Query: 290  AVLSHELRNPLNVIGGWVHVLKAGGRTPEQMEKGLTAIDRSVKAQTRLIADILDVSRISS 349
            A +SHE+R P+N + G + + +         +  L     + ++   LI DILD++RI +
Sbjct: 720  ATMSHEIRTPMNAVIGMIELAQKNAEQGRVDQDALEVASMASRSMLELIGDILDIARIET 779

Query: 350  GKLRLHREWAEPRSLVSAAIEALMAPVAAKRLNILFDRQE-ADPPAWLDATRFQQIVWNL 408
            G L L  E A    L+++           K L +  +     D    +D  RF+Q+V NL
Sbjct: 780  GHLSLSLEQANLHELLASVARVFEGLARDKGLLLQVELDPMIDRAVLIDPLRFKQVVSNL 839

Query: 409  LSNAIKFSDEG----GRILIQLQRQDHM-LHLSVQDFGRGIRADFLHHLFDRFSQSDSPD 463
            L NAIKF+  G    G         DH+ L L V+D G GI A+    LF  F Q  + D
Sbjct: 840  LGNAIKFTATGQVRLGAQSTPTLAGDHLSLRLCVEDTGIGISAEDQQRLFSPFIQGSNND 899

Query: 464  NRLHGGLGLGLSIVKNLAELHGGSVSAHSEGEGLGATLRVTLGVIPSDDTPLLLVDALDS 523
                 G GLGL I +NL E+ GG +   S   G G  + +TL +  +  TP+        
Sbjct: 900  QSARSGSGLGLVISRNLCEMMGGQLHL-SSVLGKGTRVDLTLTLATATATPVY------- 951

Query: 524  RAGGAAAVTDRTLHGLDVLLVEDNADASEIITVVLADAGATVRLALDVEGALQLFDQKWP 583
                A A      H L++L+V+D      ++   L+  G  +  A D      L+     
Sbjct: 952  ----APAPPAPATHALNLLVVDDYPANRLLLARQLSFLGHRIVTAEDGAEGFALWQDGQF 1007

Query: 584  DVLISDIGLPGRDGYDLIREVRQRERTLGKPRLFSIAHTAFTRPQDLAKTTEAGFDAHLG 643
            D +I+D  +P  DGY L R++R +ER  G      +  TA  +P++  +  +AG D  L 
Sbjct: 1008 DGVITDSNMPIMDGYTLARDIRAQERQRGLVPCLLLGFTANAQPEETERCRQAGMDGCLF 1067

Query: 644  KPLQPHAL-VALVAGHAAP 661
            KP     L  AL +  AAP
Sbjct: 1068 KPTGLDDLRTALASRTAAP 1086



 Score = 36.6 bits (83), Expect = 7e-06
 Identities = 38/144 (26%), Positives = 56/144 (38%), Gaps = 11/144 (7%)

Query: 2    PPEPLINTTIDRSRHTVLVVDDNPTTRYATARTIRAAGFQTREAGTGGEALAL-ASQHIS 60
            PP P  +         +LVVDD P  R   AR +   G +   A  G E  AL       
Sbjct: 955  PPAPATHAL------NLLVVDDYPANRLLLARQLSFLGHRIVTAEDGAEGFALWQDGQFD 1008

Query: 61   AVVLDVHLPDFTGFEVCHELRIKP-STATLPVVHLSATF-VRNEDKVAGLNAGADAYLVH 118
             V+ D ++P   G+ +  ++R +      +P + L  T   + E+      AG D  L  
Sbjct: 1009 GVITDSNMPIMDGYTLARDIRAQERQRGLVPCLLLGFTANAQPEETERCRQAGMDGCLFK 1068

Query: 119  PVEPPVLIATLQALIRARMAEEKQ 142
            P     L   L +  R    EEK+
Sbjct: 1069 PTGLDDLRTALAS--RTAAPEEKE 1090