Pairwise Alignments

Query, 301 a.a., Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) from Variovorax sp. SCN45

Subject, 272 a.a., shikimate dehydrogenase-related enzyme from Pseudomonas putida KT2440

 Score = 77.0 bits (188), Expect = 4e-19
 Identities = 73/234 (31%), Positives = 105/234 (44%), Gaps = 10/234 (4%)

Query: 24  FPVVGNPVAQVKAPLAFNALFRRAGIDALVVPLELQPASVLDTCRGLLDSGSIGG--LLV 81
           + V+G P+   K+PL  + LF +A    L         S+ D    +L   S GG  + +
Sbjct: 5   YAVIGRPINHTKSPL-IHGLFAQASNQQL--EYGAIEGSLDDFEAQVLQFRSEGGKGMNI 61

Query: 82  TVPYKKTLFELVAQPGEPARLVGAVNAIRRSAEGAIAGDLFDGIGFVAGLRAAGHEP-AG 140
           T P+K   FEL  +  E A+L  A NA+ +  +G I  + FDGIG +  +     EP   
Sbjct: 62  TAPFKLRAFELADRRSERAQLARAANAL-KFEDGRIVAENFDGIGLLRDIEENLGEPLRN 120

Query: 141 RKVLLVGAGGAGSAVAAALLSAGVAWLGLFDVHTAQAEALAAHLQSRFSGSTVVSLRTLS 200
           R+VLL+GAGGA        L AG + L +   +   A+ALA   +   S   +     L 
Sbjct: 121 RRVLLLGAGGAVRGALLPFLQAGPSELVI--ANRDMAKALALRNELDHSRLRISRYEALE 178

Query: 201 EVDCDIAVNATPLGMKPGDPLPLDPAALPAGTLVVDVIMQPAETPLLRHAAQRG 254
               DI VNAT   +    P PL    L    L  ++      TP LR A ++G
Sbjct: 179 GQSFDIVVNATSASLTADLP-PLPADVLGEAALAYELAYGKGLTPFLRLAREQG 231