Pairwise Alignments

Query, 171 a.a., FIG006045: Sigma factor, ECF subfamily from Variovorax sp. SCN45

Subject, 171 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas putida KT2440

 Score =  150 bits (378), Expect = 1e-41
 Identities = 75/161 (46%), Positives = 107/161 (66%), Gaps = 3/161 (1%)

Query: 11  QIESLYSDHHGWLRGWLGKKLGDMHQGADLAHDTFVRLLAKQEAVAIQEPRAFLTTVAQR 70
           ++  LY  HH WLRGWL  ++G     ADLA DTFVRLL  ++   ++EPRA+L+++A+ 
Sbjct: 11  EVALLYQSHHTWLRGWLRSRVGCSEHAADLAQDTFVRLLRARQMSPLKEPRAYLSSIARG 70

Query: 71  VLANHWRRQQLERAYLEALAQVPQAMAPSEEERAILLQTLTEIDRLLNGLPPPVRRVFLL 130
           ++ + +RR+ LERAY E LA +P+A  PSEE++ ++L +L  +DR L  L P VR+ FLL
Sbjct: 71  LMIDQFRRRALERAYQEGLAHLPEAEVPSEEDKLVILDSLERLDRALQQLKPRVRQAFLL 130

Query: 131 TQLDGLGHAEVAALMSISITTVKRYLVKAAMQCY---FADA 168
            QLDGL   +VA  + +S  TV+R L KA   CY   +ADA
Sbjct: 131 AQLDGLSIVQVAQRLGVSRATVERDLAKALGACYRLRYADA 171