Pairwise Alignments

Query, 314 a.a., ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 315 a.a., ABC transporter permease from Pseudomonas simiae WCS417

 Score =  216 bits (550), Expect = 6e-61
 Identities = 123/313 (39%), Positives = 185/313 (59%), Gaps = 3/313 (0%)

Query: 2   FRFAASRIAMAIPTLLIVAVSVFVLIRLIPGDPAQLLLGDLATPASLAELRARLGLDRSV 61
           +RF   R    +P L  +++  FVL+R IPGDPA+ LLG  +TP +L ++RA+ GLD+ +
Sbjct: 6   YRFVLYRPLQLLPVLFGISLITFVLVRSIPGDPARALLGSRSTPDALLKIRAQYGLDQPL 65

Query: 62  PAQFGIWFGHVLQGDLGTSINSGQDVLSLVTERFLISGRIVLVAVALAAMVAVPAGMIAA 121
             Q+  +  ++L+GDLG S+    D L L+  R   +  +VL +V LA ++AVP    AA
Sbjct: 66  WLQYFYFLKNLLKGDLGQSLLYKVDALKLIVTRIEPTLVLVLGSVVLALLIAVPLATFAA 125

Query: 122 WKQNRAPDLLLVGAATLLVSIPTFWLGLLLLLLFGLKLGWLPVVGYVGISEDWKNGLLYL 181
             +    D L+    T+ + +P FWLGL+L+LL  ++ G  PV GY      W +   ++
Sbjct: 126 RNKGGWADNLIRVFTTVGLGMPAFWLGLMLILLLSVQWGLFPVSGY---GRTWLDKAHHM 182

Query: 182 LLPVLTLFLHEIGVLMRMARASTLEVLRLDYITHARAKGLSERAVLMRHAFKNAFGPTWT 241
           +LP LT+ L    VL+R  RAS L  L+ D++T ARA+GL E AV  RH   N+  P   
Sbjct: 183 VLPCLTIALALSAVLVRNLRASMLMELQADHVTAARARGLLEAAVFRRHVLPNSLVPAVN 242

Query: 242 LIGLVLGNLLGGIAVVETVFTIPGLGRLLVDAIFARDYPVIQGCLLFVAVIYVAVNLVID 301
           L+ + +G L+ G  V+E++F IPG+G+LLV  IF RDY V+QG  + +A   V VN + D
Sbjct: 243 LLAVNIGWLISGTVVIESLFAIPGIGQLLVRGIFTRDYMVVQGVAMVLACATVIVNFIAD 302

Query: 302 LCYPFFDPRVAVE 314
           +     DPRV ++
Sbjct: 303 VVTVALDPRVKMQ 315