Pairwise Alignments

Query, 314 a.a., ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 328 a.a., ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  221 bits (564), Expect = 1e-62
 Identities = 126/320 (39%), Positives = 182/320 (56%), Gaps = 9/320 (2%)

Query: 1   MFRFAASRIAMAIPTLLIVAVSVFVLIRLIPGDPAQLLLGDLA--TPASLAELRARLGLD 58
           + R AASR+  A+  +L V V  FVL+   PGDP + + G     +P  +A+LR + GLD
Sbjct: 6   LLRHAASRLLQALGLVLAVVVLNFVLVHAAPGDPVETIAGASGGMSPELMAQLRTQYGLD 65

Query: 59  RSVPAQFGIWFGHVLQGDLGTSINSGQDVLSLVTERFLISGRIVLVAVALAAMVAVPAGM 118
           +S+P Q  ++ G V QGDLG S      V  ++ ER   +  +VL +V LA       G+
Sbjct: 66  KSLPVQLAVYLGKVAQGDLGYSYFFNLPVTQMIGERLPATLLLVLSSVLLAFFAGTALGV 125

Query: 119 IAAWKQNRAPDLLLVGAATLLVSIPTFWLGLLLLLLFGLKLGWLPVVGYVGISEDWKNGL 178
           +++ K N      +   + +  + P FWLG++L++L       LPV G   I      G 
Sbjct: 126 LSSRKPNGWLSQFITVLSLVGFAAPVFWLGIMLVILLASVFPILPVAGMRSIDSTGAGGF 185

Query: 179 L-------YLLLPVLTLFLHEIGVLMRMARASTLEVLRLDYITHARAKGLSERAVLMRHA 231
                   +L+LP LTL L  +    R+AR+S L+VL  D+I  ARAKGL++R VL +HA
Sbjct: 186 ADMLDVAQHLVLPTLTLSLVYLAQYSRLARSSMLDVLGSDFIRTARAKGLADRVVLYKHA 245

Query: 232 FKNAFGPTWTLIGLVLGNLLGGIAVVETVFTIPGLGRLLVDAIFARDYPVIQGCLLFVAV 291
            +NA  P  T++GL  GN+L G  +VETVF  PGLGRL  +++  RDYP I G LLF ++
Sbjct: 246 LRNALLPVVTVLGLQFGNVLAGAILVETVFNWPGLGRLAFESVLRRDYPTILGVLLFSSI 305

Query: 292 IYVAVNLVIDLCYPFFDPRV 311
           + V +N + DLCY F DPR+
Sbjct: 306 VVVVMNQLTDLCYRFIDPRI 325