Pairwise Alignments

Query, 314 a.a., ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 333 a.a., ABC transporter, membrane spanning protein (peptide) from Agrobacterium fabrum C58

 Score =  208 bits (530), Expect = 1e-58
 Identities = 111/313 (35%), Positives = 183/313 (58%), Gaps = 8/313 (2%)

Query: 9   IAMAIPTLLIVAVSVFVLIRLIPGDPAQLLLGD--LATPASLAELRARLGLDRSVPAQFG 66
           +  A+PT+ ++    F +++L PGD A  +  +   AT  ++A++R   GLD  +  Q  
Sbjct: 20  LIQAVPTMFVIVTLGFFVLQLAPGDAADYMAAESGAATQETVADIRRAFGLDLPLLDQLA 79

Query: 67  IWFGHVLQGDLGTSINSGQDVLSLVTERFLISGRIVLVAVALAAMVAVPAGMIAAWKQNR 126
            ++  +    LG S   G  V  L+ ER   +  ++++A+ +A +V + AG I A    R
Sbjct: 80  NYYTSLAHFSLGISPRYGVPVADLIMERLPGTLTLMVLAIVIALLVGIAAGTIMALNATR 139

Query: 127 APDLLLVGAATLLVSIPTFWLGLLLLLLFGLKLGWLPVVGY--VGISEDWKNGLL----Y 180
           A D +L  A+ L  S+PTFW+GL+ +++F +KLGWLP  G   +G S      L+    Y
Sbjct: 140 AADRILSVASLLFYSVPTFWIGLIFIIVFSVKLGWLPAGGMKTIGASSGGFGWLIDRVSY 199

Query: 181 LLLPVLTLFLHEIGVLMRMARASTLEVLRLDYITHARAKGLSERAVLMRHAFKNAFGPTW 240
            LLP  +L L+ + +  R+ R+S LEV+  D++  A+AKGL+ R V++RH  +NA  P  
Sbjct: 200 ALLPATSLALYYMAIYARLTRSSILEVIGQDHVRTAKAKGLAPRQVVLRHVLRNALIPIT 259

Query: 241 TLIGLVLGNLLGGIAVVETVFTIPGLGRLLVDAIFARDYPVIQGCLLFVAVIYVAVNLVI 300
           T+ G+ +  +LGG  V+ETVF+ PG+GRL  DA+ AR+Y ++ G +L  +V+ + VN ++
Sbjct: 260 TVAGIHVAGILGGAIVIETVFSWPGMGRLAFDAVMAREYTLLLGIMLVSSVLVICVNAIV 319

Query: 301 DLCYPFFDPRVAV 313
           D+     DPR+ V
Sbjct: 320 DIIQAALDPRIEV 332