Pairwise Alignments

Query, 314 a.a., ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 315 a.a., dipeptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  242 bits (618), Expect = 7e-69
 Identities = 123/308 (39%), Positives = 190/308 (61%)

Query: 4   FAASRIAMAIPTLLIVAVSVFVLIRLIPGDPAQLLLGDLATPASLAELRARLGLDRSVPA 63
           +   R+ +AIPTLLI+++ VF L +L+PGDP   + G+   PA++  LR +  L+  VP 
Sbjct: 4   YIGKRLLVAIPTLLIISIFVFSLQKLLPGDPVLAMAGEERDPATIEFLREKYRLNDPVPL 63

Query: 64  QFGIWFGHVLQGDLGTSINSGQDVLSLVTERFLISGRIVLVAVALAAMVAVPAGMIAAWK 123
           Q+  W G V+ GD G S+ + Q VL L+ ++  ++ ++ ++A+  A ++ +P G++AA K
Sbjct: 64  QYLNWLGGVVTGDFGISLRTNQPVLELIGQKLPVTIQLAVMAMFFAMVIGIPIGILAAVK 123

Query: 124 QNRAPDLLLVGAATLLVSIPTFWLGLLLLLLFGLKLGWLPVVGYVGISEDWKNGLLYLLL 183
           +N   D      A   +SIP FWLG++L+LL  +KLGWLP  GY  I  D    +  +++
Sbjct: 124 KNTWIDYTANIVALSGLSIPNFWLGIMLILLVSVKLGWLPASGYESIFVDPVRSIETMIM 183

Query: 184 PVLTLFLHEIGVLMRMARASTLEVLRLDYITHARAKGLSERAVLMRHAFKNAFGPTWTLI 243
           P   L       LMR  R++ + VL  DYI  ARAKGLS R +++ H+F+NA  P  TL+
Sbjct: 184 PAFVLGNALAATLMRHTRSAMVAVLSSDYIRTARAKGLSPREIILSHSFRNALLPVITLL 243

Query: 244 GLVLGNLLGGIAVVETVFTIPGLGRLLVDAIFARDYPVIQGCLLFVAVIYVAVNLVIDLC 303
            L+ G LL G  + E +FTIPG G++ VDA+F RDY V+QG +L  AV ++ +NL+ D+ 
Sbjct: 244 ALLFGELLAGAVLTEQIFTIPGFGKMTVDAVFTRDYAVVQGIVLCTAVGFILMNLLADIA 303

Query: 304 YPFFDPRV 311
           Y   +PR+
Sbjct: 304 YVLLNPRL 311