Pairwise Alignments

Query, 314 a.a., ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 314 a.a., peptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  452 bits (1163), Expect = e-132
 Identities = 223/314 (71%), Positives = 263/314 (83%)

Query: 1   MFRFAASRIAMAIPTLLIVAVSVFVLIRLIPGDPAQLLLGDLATPASLAELRARLGLDRS 60
           M RF  SR+ MA+PT+  V+++VF LIR IPGDPA L+LGD+A P  +  +R  LGLD+S
Sbjct: 1   MIRFILSRLLMALPTIAFVSITVFALIRFIPGDPAALMLGDMAQPEQIEAMRTELGLDKS 60

Query: 61  VPAQFGIWFGHVLQGDLGTSINSGQDVLSLVTERFLISGRIVLVAVALAAMVAVPAGMIA 120
           +  QF IW G+V+QGD G SI + + VL LV  RFL+S  IV+VAV LA+++AVPAG+IA
Sbjct: 61  MLQQFVIWAGNVVQGDFGRSIVNDEAVLPLVVSRFLVSAEIVVVAVLLASLIAVPAGVIA 120

Query: 121 AWKQNRAPDLLLVGAATLLVSIPTFWLGLLLLLLFGLKLGWLPVVGYVGISEDWKNGLLY 180
           AWKQN   DL LVG ATLL+SIPTFWLGLLLLL FGLKLGWLPV+GYV IS++   G+LY
Sbjct: 121 AWKQNSLTDLALVGTATLLLSIPTFWLGLLLLLFFGLKLGWLPVLGYVSISDNLVGGMLY 180

Query: 181 LLLPVLTLFLHEIGVLMRMARASTLEVLRLDYITHARAKGLSERAVLMRHAFKNAFGPTW 240
           L+LPV+TL +HE+GVL+RMARASTLEVLRLDYITHARAKGLSE AVL RHAFKNAFGPTW
Sbjct: 181 LVLPVMTLVIHEMGVLIRMARASTLEVLRLDYITHARAKGLSESAVLWRHAFKNAFGPTW 240

Query: 241 TLIGLVLGNLLGGIAVVETVFTIPGLGRLLVDAIFARDYPVIQGCLLFVAVIYVAVNLVI 300
           T+IGL+LGNLLGGIAV+ETVFTIPGLGRL+VD+IFARDYPVIQGCLLFV++ YV VNL +
Sbjct: 241 TMIGLILGNLLGGIAVIETVFTIPGLGRLMVDSIFARDYPVIQGCLLFVSLSYVLVNLFV 300

Query: 301 DLCYPFFDPRVAVE 314
           DL YP FDPRV  E
Sbjct: 301 DLLYPLFDPRVVAE 314