Pairwise Alignments

Query, 314 a.a., ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 302 a.a., dipeptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  242 bits (618), Expect = 7e-69
 Identities = 128/299 (42%), Positives = 185/299 (61%)

Query: 13  IPTLLIVAVSVFVLIRLIPGDPAQLLLGDLATPASLAELRARLGLDRSVPAQFGIWFGHV 72
           I  + +V   VFV++R+ PGDPA ++LG  AT   +AELR RLGLD+S+  Q+  + G +
Sbjct: 2   IVVMFLVVTIVFVILRVTPGDPAAVMLGPDATAQDIAELRTRLGLDQSLGVQYVYYIGQL 61

Query: 73  LQGDLGTSINSGQDVLSLVTERFLISGRIVLVAVALAAMVAVPAGMIAAWKQNRAPDLLL 132
           L+GDLG SI     V S + +R   +  + + ++ +A ++A+P G+ AA+++    D   
Sbjct: 62  LKGDLGQSIFLNMPVGSALLDRAEPTFFLTIFSLLIAGVIALPIGIYAAYRRGSFVDQAA 121

Query: 133 VGAATLLVSIPTFWLGLLLLLLFGLKLGWLPVVGYVGISEDWKNGLLYLLLPVLTLFLHE 192
              A L  SIP+FWLGL+L+  F ++L   PV GY G    +   + +L LP + L L  
Sbjct: 122 TTIAMLAASIPSFWLGLILMQFFAVRLDLFPVSGYGGPGASFLERMYHLTLPAIALGLVS 181

Query: 193 IGVLMRMARASTLEVLRLDYITHARAKGLSERAVLMRHAFKNAFGPTWTLIGLVLGNLLG 252
             +++R  RAS L+VL  DY+  ARAKG+ ER V+M+HA KNA  P  T++GL    L+ 
Sbjct: 182 SALILRFTRASMLDVLGDDYVRTARAKGVKERRVVMKHALKNALIPILTVLGLTAAVLIS 241

Query: 253 GIAVVETVFTIPGLGRLLVDAIFARDYPVIQGCLLFVAVIYVAVNLVIDLCYPFFDPRV 311
           G  V ETVF +PG+G L+V A+  RDYPVIQG LL +A +YV +N  ID+ Y   DPRV
Sbjct: 242 GAVVTETVFGLPGVGNLVVSAVLRRDYPVIQGALLVIAGLYVLINFAIDMLYLLVDPRV 300