Pairwise Alignments

Query, 426 a.a., TRAP-type C4-dicarboxylate transport system, large permease component from Variovorax sp. SCN45

Subject, 431 a.a., TRAP transporter, DctM subunit from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  290 bits (743), Expect = 5e-83
 Identities = 167/431 (38%), Positives = 262/431 (60%), Gaps = 10/431 (2%)

Query: 1   MTILVFVGSLLVAMAMGIPIAFSLLACGVALMWHLDLFDAQI-----LAQNVIGGADSFP 55
           +TI++ V S +  M +G+P+A+SL   G + +  L +  A +     +AQ +  G +SF 
Sbjct: 4   ITIIILVLSFITLMGLGVPVAWSL---GFSSLLTLMVTVAAVPSMTTIAQRMGAGLNSFS 60

Query: 56  LLAVPFFMLAGEIMNVGGLSKRIVDLALALVGHVKGGLGYVTIMAGCLLSALSGSAVADA 115
           LLA+PFF+LAGEIMN GG++ R+++LA AL G + GGL YV ++A  L  A++GSAVA A
Sbjct: 61  LLAIPFFILAGEIMNKGGIANRLINLAKALTGKLPGGLLYVNVIAAMLFGAIAGSAVAAA 120

Query: 116 AALTALLLPMMVKAGHDKARAGGLIAATGIIGPVIPPSIGLVIFGVAAN-VSISKLFMAA 174
           +AL  +L   M   G+ K     +   +   G VIPPS  L+++ +A+  VSI+ LF+A 
Sbjct: 121 SALGGILGKRMEDEGYPKELGVAVNVTSSTTGLVIPPSNVLIVYSLASGGVSIAALFVAG 180

Query: 175 IVPGLLIGGALWVTWAWLVRHEKIQPPPRKPAREVMKAARDAGWALLLPVIILVGLRMGV 234
            +PGL +G  L +T A+ ++ +K+        +E+ K    A  +L L VI++ G+ MGV
Sbjct: 181 YIPGLFMGLLLMLTAAYFIKKKKLPAGEPTSFKELGKVFFSAAPSLTLLVIVIGGIVMGV 240

Query: 235 FTPTEAAVVAAVYAFFVATFIYRELSFDALYKVFVSAAKTSAVVMFLIAAAMVSAWLITV 294
           FT TEA+ +A +Y   ++ F Y EL    L  + + ++ T+AVV  LIA +M  +W+++ 
Sbjct: 241 FTATEASAIAVLYCLGLS-FFYGELKPRDLPAILLKSSATTAVVAMLIATSMAMSWVMSS 299

Query: 295 ADLPSKVVGLLEPFMGNKILLMIMVMLLVMAVGTAMDMTPTILILTPVLMPVVIAAGIDP 354
            D+P  +  +L     NK +++I++ L+++ VG  MDMTP +LI TP+ +PVV   GIDP
Sbjct: 300 EDIPQSISAVLLSLSDNKFVILIIINLILLFVGIFMDMTPAVLIFTPIFLPVVTELGIDP 359

Query: 355 VYFGVMFIINNSIGLITPPVGVVLNVVAGVGKMKMDDVTRGVLPFMAAEFAIMFVMVIFP 414
           V+FG++ ++N  IGL TPPVG VL +  GV K  + +V + +LPF  A    + V+ I+P
Sbjct: 360 VHFGIIMVLNLCIGLCTPPVGSVLFIGVGVAKTSISNVVKPLLPFFIAMIIGLAVITIWP 419

Query: 415 QLVTVPARWFG 425
           QL       FG
Sbjct: 420 QLTLWLPSLFG 430