Pairwise Alignments

Query, 324 a.a., ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 336 a.a., dipeptide ABC transporter - putative membrane subunit from Pseudomonas putida KT2440

 Score =  231 bits (590), Expect = 1e-65
 Identities = 130/333 (39%), Positives = 203/333 (60%), Gaps = 18/333 (5%)

Query: 5   LLRRVLQALGVVVV----MTVIVFIGLHAI-GNPIDILIGEDMNQQERLA-AIARLGLDQ 58
           +L  + + LG+++     +T++ F  +  I G+P+++++GE     E  A A+ RLGL++
Sbjct: 1   MLSFIARRLGLLIPTFFGITLLTFALIRLIPGDPVEVMMGERRVDPEMHAQAMERLGLNK 60

Query: 59  PLWRQYLAFVDGALHGSLGRSFVYQEDAVRLILQRLPATMELAFAALLMAIVVGVPLGLF 118
           PL  QYL +V     G LG S   +E   R  L   PAT+ELAFAALL A VVG+  G+ 
Sbjct: 61  PLPVQYLDYVGKLAQGDLGESLRTRESVWREFLTLFPATLELAFAALLFAGVVGLLAGVI 120

Query: 119 AGMKPEHPVSRTLMATSIVGFSLPAFWVALMLIMVFSVQLGWLPASGRGATRELFGVQWS 178
           A +K        +M  S+ G+S+P FW  L+LIM FSV LGW P SGR         +  
Sbjct: 121 AALKRGSLFDHGVMGISLAGYSMPIFWWGLILIMFFSVSLGWTPVSGRIDLLYDIEPKTG 180

Query: 179 WLTLD------------GWQHLLLPAFNLALFKISLVLRLTRAGVREVLPQDYVKFARAK 226
           ++ +D               HL+LPA  L    ++++ R+TR+ + EVL +DY++ ARAK
Sbjct: 181 FMLIDTLLSDEEGAFKDAVMHLILPAIVLGTIPLAVIARMTRSSMLEVLREDYIRTARAK 240

Query: 227 GLTPTRVVLMHVMRNTMIPLVTVLGLELGATIAYAVVTESIFAWPGAGKLILDSINSLDR 286
           GL+P RVV +H +RN +IP++TV GL++G  +A AV+TE+IF+WPG GK ++++I + D 
Sbjct: 241 GLSPARVVFVHGLRNALIPVLTVFGLQVGTLLAGAVLTETIFSWPGIGKWLIEAIGARDY 300

Query: 287 PVVVAYLMVVVVIFVTLNLIVDLLYKLLDPRVR 319
           PVV   ++++  + + +N +VD+LY L +PR+R
Sbjct: 301 PVVQNGILLIACLVILVNFVVDILYGLANPRIR 333