Pairwise Alignments

Query, 299 a.a., ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 290 a.a., putative Opine ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  211 bits (537), Expect = 2e-59
 Identities = 112/274 (40%), Positives = 177/274 (64%), Gaps = 11/274 (4%)

Query: 23  SRIAIGGLVVLGIVVLAALLAPWITPQNPYDLLQLDVLDARLPPGSHSSEGGYTYWLGTD 82
           +R++  G+ +L ++VL AL AP I P   YD LQ ++     PP +        +WLGTD
Sbjct: 22  NRLSWIGIGLLVMIVLVALFAPLIAP---YDPLQQNIAYRLEPPSAE-------FWLGTD 71

Query: 83  GQGRDLYSAIVYGLRISLTVGVGSALIAAVVGTLVGLIAAYAGGKVDALLMRLVDLLLSF 142
             GRD+ S ++YG R+SL VG  + +IA VVG+ +G+IA Y GG  D L+   VD+LLSF
Sbjct: 72  TYGRDVLSRLIYGTRVSLLVGFVAVMIAMVVGSALGVIAGYVGGITDRLITGFVDVLLSF 131

Query: 143 PTILMALMILAYVGKGVGNVMLTLVLLEWAYYARTARGQALVEARREYVDAAQGQGIPRW 202
           PT+L+ LM+ A +G  + N+++ + + E A + R AR   +   +R++V+A +  G    
Sbjct: 132 PTLLLGLMVAAMLGASLENLIIAIAITEIAPFVRIARAPTIALKQRDFVEAGRSLGYGPG 191

Query: 203 RIVTGHILPNCLPPLLVIGALQIARAITLEATLSFLGLGVPITEPSLGLLISNGYQYLLS 262
           R++T HILPN +  +LV+GAL +A AI  EA+LSF+GLGVP   P+ G +I  G++ +L 
Sbjct: 192 RLMTVHILPNMISEVLVLGALWMATAIRTEASLSFIGLGVPPPAPTWGSMIREGFENIL- 250

Query: 263 NEYWISFFPGVALLAAIVAINLVGDQLRDVLNPR 296
           + +W++ FP +A+L  ++A++L+GD LRD  +P+
Sbjct: 251 DAWWLTVFPSLAILLTVLALSLLGDALRDANDPK 284