Pairwise Alignments

Query, 299 a.a., ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 298 a.a., D,D-dipeptide ABC transporter permease from Escherichia coli ECRC62

 Score =  200 bits (508), Expect = 4e-56
 Identities = 99/274 (36%), Positives = 165/274 (60%), Gaps = 11/274 (4%)

Query: 23  SRIAIGGLVVLGIVVLAALLAPWITPQNPYDLLQLDVLDARLPPGSHSSEGGYTYWLGTD 82
           S + + G V++ +++L  + +PW+   +P     +D+    LPP +        +W GTD
Sbjct: 30  SPLTVTGAVIIVLMLLMMIFSPWLATHDPN---AIDLTARLLPPSA-------AHWFGTD 79

Query: 83  GQGRDLYSAIVYGLRISLTVGVGSALIAAVVGTLVGLIAAYAGGKVDALLMRLVDLLLSF 142
             GRDL+S ++ G + S+  G+    IA ++G+L+G ++   GG+ DA++MR++D++LS 
Sbjct: 80  EVGRDLFSRVLVGSQQSILAGLVVVAIAGMIGSLLGCLSGVLGGRADAIIMRIMDIMLSI 139

Query: 143 PTILMALMILAYVGKGVGNVMLTLVLLEWAYYARTARGQALVEARREYVDAAQGQGIPRW 202
           P++++ + + A +G  + N ML + ++   +Y R ARGQALV  +  YV AA+  G  RW
Sbjct: 140 PSLVLTMALAAALGPSLFNAMLAIAIVRIPFYVRLARGQALVVRQYTYVQAAKTFGASRW 199

Query: 203 RIVTGHILPNCLPPLLVIGALQIARAITLEATLSFLGLGVPITEPSLGLLISNGYQYLLS 262
            ++  HIL N LPPL+V  +L I  AI + ATL F+GLG        G +++NG  Y+L 
Sbjct: 200 HLINWHILRNSLPPLIVQASLDIGSAILMAATLGFIGLGAQQPSAEWGAMVANGRNYVL- 258

Query: 263 NEYWISFFPGVALLAAIVAINLVGDQLRDVLNPR 296
           +++W   FPG A+L   V  NL GD +RD+L+P+
Sbjct: 259 DQWWYCAFPGAAILLTAVGFNLFGDGIRDLLDPK 292