Pairwise Alignments

Query, 521 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 533 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  148 bits (374), Expect = 4e-40
 Identities = 130/477 (27%), Positives = 214/477 (44%), Gaps = 52/477 (10%)

Query: 60  RDGGKLEPALASSWK-ALDDKTWEFKLRTDIKWQDGTPFS------ADDIVFSFQRS--- 109
           R G ++EP LA+SW  + D  T+ F LR  +K+     FS      ADD++F+F R    
Sbjct: 66  RGGTEVEPGLATSWDISQDGLTYTFHLRDGVKFHTTDFFSPTRDFNADDVLFTFNRLLDA 125

Query: 110 ----RNVPGSVASY---SGALRTVESVTAKDPATLIVKTNTPNPM----LPLEIASIYIV 158
               R    S + Y    G   T++SV   D  T+    N  +      L +  AS+   
Sbjct: 126 QSPFRQAYPSESPYFTDMGLNTTIKSVDKLDDHTVRFNLNNVDASFVQNLAMSFASVQSA 185

Query: 159 --SKHVGEKSKTEDYNAGRAVVGTGPYKFVSYVPGDRTVFERNPGYYGPKPL-WEKVNYR 215
             +  + ++ K E+ N  +  VGTGP+ F  Y    +  +  N  Y+ P+ +  + + + 
Sbjct: 186 EYAAQLLKQGKAEEIN--QKPVGTGPFVFKRYQKDSQIRYVANKQYWKPEDVKLDNLVFA 243

Query: 216 FINNGAARTAALLAGDVDVIDKVAVTDVEKLRKDPKVSVYTYPGLRVLLLQPTFKAGPNE 275
              + A+R   L AG+  V       D+E +++DP + V         L Q  F  G   
Sbjct: 244 ITPDAASRLQKLKAGECQVSGYPRPADIEVMKQDPNLHV---------LQQAGFNLG--- 291

Query: 276 FITDNAGKPLEKNPLLDVRVRQALSLAINRKAIVDRVLQGTVTEANQWMPKGSFGYNPDV 335
           F+  N   P    PL  ++VRQAL +AI++ AI+  V Q     A   +P   + Y+P +
Sbjct: 292 FLAYNVTHP----PLDQLKVRQALDMAIDKPAIIKAVYQSAGQLAQNALPPAQWSYDPTI 347

Query: 336 KDIAYNAEQAKKLLAEAGFPQGFQI---AIHVPGDRYPQAPETVQAVAQFWSRIGVKTKV 392
           KD  Y+  +AK LL EAG   G  +   A+ V     P A  + Q + Q W ++G+K  +
Sbjct: 348 KDAPYDPTKAKALLKEAGVAPGTTVNLWAMTVQRASNPNARMSAQMIQQDWEKVGIKANI 407

Query: 393 EVVPWAVYSGRANKNEYAVSVIAWGNGTGEAGYGLLQTLTTPDAKRGRGSNNWGRYSNES 452
               W  Y  RA   E+   +  W    G+     L  L +  A +G   +N+ ++ N +
Sbjct: 408 VSYEWGEYIKRAKNGEHDAMIYGWTGDNGDPD-NWLGVLYSCAAVKG---SNYAKWCNPA 463

Query: 453 VDKALDAATVEFDAKRREAIFRHAAKLVTDDVGQIPLYH---YQNIWAAKKGLKVVP 506
            DK +  A V  D ++R   ++ A K++ + V   P+ +   +Q +    K  K+ P
Sbjct: 464 YDKLVQQAKVSNDREQRIKWYQQAQKILKEQVPITPIANSTVFQPLRKEVKDFKISP 520