Pairwise Alignments

Query, 487 a.a., Tetrapartite efflux system, outer membrane factor lipoprotein FusA-like from Variovorax sp. SCN45

Subject, 496 a.a., RND efflux transporter, outer membrane protein from Pseudomonas putida KT2440

 Score =  159 bits (402), Expect = 2e-43
 Identities = 143/483 (29%), Positives = 228/483 (47%), Gaps = 28/483 (5%)

Query: 6   RLLAAAAAATLLAGCAHSPVGPDHVAPATLSPAQAASAGPFLSAAG----NATDADLPPS 61
           RLL A     LL+ C  SP   D+  P   S     +A  F  A G    + +DA    +
Sbjct: 22  RLLGAGLCVALLSACTLSP---DYHRPELNS-----TAAQFKHAEGWTQASPSDAIARGA 73

Query: 62  WWHLYQDPLLDALVDQAFAHNTDLRQAIASFEREQALEAEVRGSQRPTVALNGGPG-FGH 120
           WW +Y D  L+ALV++    N  + Q+ A + + QAL    R +  P++ L+        
Sbjct: 74  WWEIYGDAGLNALVEELNRSNQTVAQSEAQYRQAQALVRSSRAALFPSLDLSTSKNRSAQ 133

Query: 121 VSGLTLVQRDYEPPG-RFTYGAGANLSYQLDLFGQLHRAIEAAEAGSGAAQAAVDLVRVN 179
            +G +         G R TY A   +S+++DL+G+L   + A EA + A+ A +  +R++
Sbjct: 134 GTGSSSSSLSNNSSGIRNTYNAQLGVSWEIDLWGKLRETLNANEASAEASFADLASIRLS 193

Query: 180 VAGGTARAYAEVCTTGLRLRSAHASVRLQEEAVQLAQRLQQAGKVGTIDTARARGQLELL 239
                 + Y ++     + R   A+V   E ++++ +   +AG  G    A+AR QL+  
Sbjct: 194 QQSELVQNYLQLRVIDEQKRLLEATVAAYERSLRMNENQYRAGVAGPDAVAQARTQLKST 253

Query: 240 RASLPPLQAQRQNALYRLATLTGAAPRDFPAQVAGCERPPRTAAPLPVGDGASLLRRRPD 299
           +A L  L  QR      +A L G AP DF   +A  +  P     +PV   + LL RRPD
Sbjct: 254 QADLIDLIWQRAQFENAIAVLLGKAPADF--ALADSKAIP-ALPQIPVSLPSQLLERRPD 310

Query: 300 VRQAERSLAAATARIGVATAELYPKVVLGLSAG-SAGFLNRFGNRESLSYSLGPLISWTL 358
           +  AER++ AA A IGV+ A  +P + L +S G S+   + +    +  +S+GP ++ TL
Sbjct: 311 IAAAERNVMAANANIGVSRAAYFPDLSLSMSGGYSSSSFSNWIELPNRYWSVGPQLALTL 370

Query: 359 PTNGVARARIAQAEAATRQAAARFDATVLTALREAE---IALESYARE-LDRHAALAAAR 414
              G   A + +  A   Q  A++  TVL   RE E   + L+ Y  E + R  AL AAR
Sbjct: 371 FDAGKRSAEVDRTVAVYDQTVAQYRQTVLDGFREVENLLVQLKVYGDEAVVRQEALDAAR 430

Query: 415 DQSAAVARQARTLYVNGKTAQLDALDAMRTLAASE-AALAASQAQLADDQLAVFMALGGG 473
           +       Q R     G    LD ++   T  ++E + L   Q +L    + +  ALGGG
Sbjct: 431 ESLRLTENQYRA----GLIGYLDVVNVQTTALSNERSVLNLLQGRLV-ASVQLVAALGGG 485

Query: 474 WES 476
           W++
Sbjct: 486 WDA 488