Pairwise Alignments

Query, 487 a.a., Tetrapartite efflux system, outer membrane factor lipoprotein FusA-like from Variovorax sp. SCN45

Subject, 471 a.a., Multidrug efflux RND outer membrane protein OprN from Pseudomonas putida KT2440

 Score =  237 bits (604), Expect = 7e-67
 Identities = 163/472 (34%), Positives = 243/472 (51%), Gaps = 19/472 (4%)

Query: 8   LAAAAAATLLAGCAHSPVGPDHVAPATLSPAQAASAGPFLSAAGNATDADLPPS-WWHLY 66
           L  +  A  LA CA   VGPD+ APAT  PAQ +S          A D     S WW  +
Sbjct: 7   LTPSLLALALAACA---VGPDYQAPAT-EPAQLSS-----DVQAKAYDRSRFESLWWKQF 57

Query: 67  QDPLLDALVDQAFAHNTDLRQAIASFEREQALEAEVRGSQRPTVALNGGP--GFGHVSGL 124
            DP+L+ LV  +   N DLR A A  +  +++  +      P V        G G + G 
Sbjct: 58  DDPVLNQLVQASLDGNRDLRVAFARLKSARSIREDAENDPFPVVTSRASSDLGKGQIPGQ 117

Query: 125 TLVQRDYEPPGRFTYGAGANLSYQLDLFGQLHRAIEAAEAGSGAAQAAVDLVRVNVAGGT 184
           T  + + E      Y  G +++++LDLFG++ R IEA+EA    A A +  ++V++    
Sbjct: 118 TTERVNSE-----RYDLGLDMAWELDLFGRIQRQIEASEAQEAVAAADLQQLQVSLIAEL 172

Query: 185 ARAYAEVCTTGLRLRSAHASVRLQEEAVQLAQRLQQAGKVGTIDTARARGQLELLRASLP 244
             AY ++    LR + A A+++ Q+E+  + + L+ AG    +D  RA  +L  + A++P
Sbjct: 173 VDAYGQLRGAQLREKIALANLKTQQESRTITETLRDAGVGNDLDVVRADARLAGVEATVP 232

Query: 245 PLQAQRQNALYRLATLTGAAPRDFPAQVAGCERPPRTAAPLPVGDGASLLRRRPDVRQAE 304
            LQA++  A +R+ATL G  P      ++  +  P  A  LPVGD   LLRRRPD+R AE
Sbjct: 233 QLQAEQARARHRIATLLGQRPDALSVDLSP-KALPAIAKALPVGDPGELLRRRPDIRSAE 291

Query: 305 RSLAAATARIGVATAELYPKVVL-GLSAGSAGFLNRFGNRESLSYSLGPLISWTLPTNGV 363
           R LAAATA +GVATA+L+P+V L G    +A   ++ G+  + +++LGP I+W     G 
Sbjct: 292 RQLAAATANVGVATADLFPRVSLSGFLGFTAARGSQIGSSAANAWALGPSITWAAFDLGS 351

Query: 364 ARARIAQAEAATRQAAARFDATVLTALREAEIALESYARELDRHAALAAARDQSAAVARQ 423
            RAR+  A+A    A A ++  VL AL E+  A   Y +   R  +L    D S   A  
Sbjct: 352 VRARLRGAKADAEGALANYEQQVLLALEESANAFSDYDKTQQRLLSLMRQSDASRKAAEL 411

Query: 424 ARTLYVNGKTAQLDALDAMRTLAASEAALAASQAQLADDQLAVFMALGGGWE 475
           A   Y  G    L  LDA R   ++E A A  +  L    ++++ ALGGGW+
Sbjct: 412 ASIRYREGTVDYLVLLDAERERLSAEDAQAQGEVDLYRGIVSIYKALGGGWQ 463