Pairwise Alignments

Query, 273 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

Subject, 259 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score =  144 bits (362), Expect = 3e-39
 Identities = 82/219 (37%), Positives = 114/219 (52%), Gaps = 2/219 (0%)

Query: 36  HQHPMGQLVIALRGAVSCEVPGTLWMVPPQAGVWIPGGTPHSNHGTANALIFYLFVAPGA 95
           HQH   Q   A+ G +        +  PPQ GVWIP    H    +  A +  L+V   A
Sbjct: 36  HQHDWVQFSYAISGVLGVYTRDGSYFAPPQWGVWIPADAEHEVVTSMQAEMRSLYVRRDA 95

Query: 96  AT-LPTKCCTLAISPMLSEMIQHLAGLAPTY-EPGSATDRLAHVLLDQLAAMPNEDFSLP 153
               P +C  L ++P+  E+I+        Y E  SA  RL  VLLDQL ++P   FSLP
Sbjct: 96  CPWAPEQCRVLEVTPLARELIKQFCLFPADYPEDDSAEARLVAVLLDQLRSLPEVGFSLP 155

Query: 154 MPQDARLRKISHAITLDPSDRRTLQDWAAETGASERTLNRLCTAQTGLSFGRWRRQLHMI 213
           +P+   L  + + +   P   +TLQ WA E G SE+TL RL   +TGLSF  WR+++ ++
Sbjct: 156 LPRHPGLLALCNGLIAAPDQPQTLQQWARELGCSEKTLMRLFQRETGLSFRNWRQRMRLL 215

Query: 214 VALRELSGGATVQQVAYGLGYESPSAFITMFKKAFGKPP 252
            +L  L  G  V + A G GY+S SA+I  FK+ FG  P
Sbjct: 216 SSLALLEAGENVTEAALGCGYDSTSAYIAAFKQLFGATP 254