Pairwise Alignments

Query, 299 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

Subject, 299 a.a., putative DNA-binding transcriptional regulator from Pseudomonas putida KT2440

 Score =  126 bits (316), Expect = 7e-34
 Identities = 87/274 (31%), Positives = 134/274 (48%), Gaps = 6/274 (2%)

Query: 5   DLRTLRYFVAVAEERSVGRAARRLNMAQPPLSVHIKNLEAAVGTPLFRRAAHGMEITDAG 64
           +LR LRYF+AVAEE   GRAA++L ++QPPLS  I+ LE  +G  LF R    +E+++AG
Sbjct: 2   ELRHLRYFIAVAEELHFGRAAQQLGISQPPLSQQIQALEQELGARLFDRTNRRVELSEAG 61

Query: 65  NALFRRAKEALLLANEGFDAARAIGSGNRGRLTIG-TMVVLSYLVLPRLENELRRRLPEV 123
                 A++ L    +  D AR    G  G + IG T        +P+  +  R+R P V
Sbjct: 62  RLFLEEARQVLAQVEKAADVARRAQLGELGEMKIGFTSSAPFTSKIPKAIHAFRQRFPAV 121

Query: 124 EIQYVELNAVNNVSALTDSDVSVAICIPPIAQAGIATQRIGSQPLMLAVRVDSPLARLT- 182
            +   E+++ +    + D  + V +  P     G+    +  +PL+  +    PLA  T 
Sbjct: 122 HLNLKEMSSRDVAEGVFDESIEVGLMRPMPLPEGLVATELFREPLVAVINASHPLAEGTE 181

Query: 183 -SVPLARLSGLALIGLPVPEGDVDKSVVASLLRRHDVSMPIAQRVETMVSALALVLAGKG 241
             V +A L+    +  P   G    + + SL R    S   AQ     ++ + LV AG G
Sbjct: 182 QGVYMAALAPEPFVFFPRSYGSGLHAQLLSLARHAGFSPHFAQEAGEAMTIIGLVSAGLG 241

Query: 242 VAILPACAQIGRPPGVVFRPLRNVDAAMEIAACW 275
           V++LPA  Q  R  GVV+R L + +A   + A W
Sbjct: 242 VSVLPASFQRMRIEGVVYRTLLDEEA---MTAVW 272