Pairwise Alignments

Query, 353 a.a., Spermidine/putrescine import ABC transporter ATP-binding protein PotA (TC 3.A.1.11.1) from Variovorax sp. SCN45

Subject, 343 a.a., predicted polyamine ABC transporter, ATP-binding protein from Pseudomonas putida KT2440

 Score =  245 bits (626), Expect = 1e-69
 Identities = 135/330 (40%), Positives = 199/330 (60%), Gaps = 8/330 (2%)

Query: 4   LELNNVRKQYGALAVVDDLSLQLRKGELVTLLGPSGCGKTTTLRMIAGFIELSGGSIAVD 63
           ++   V + +G +  VD +S+ +  GE  ++LGPSG GKTT LR+IAGF + S GSI + 
Sbjct: 5   VQFTQVSRTFGEVKAVDQVSIDIIDGEFFSMLGPSGSGKTTCLRLIAGFEQPSSGSIRIQ 64

Query: 64  GRQISGAGRTVPPEHRGMSMIFQSYAIWPNMTVAENVAFGLNVRRVPGEESKRRVEEMLD 123
           G + +G    +PP  R ++ +FQ YA++P+M V EN+A+GL V+ V   E   R EE L 
Sbjct: 65  GVEAAG----LPPYQRDVNTVFQDYALFPHMNVLENIAYGLKVKGVGKAERHSRAEEALA 120

Query: 124 VVKLGALAQRYPAELSGGQQQRVALARAMVVRPEVLLLDEPLSNLDANLREEMAGEIRRL 183
           +V L     R PA+LSGGQ+QRVALARA+V RP VLLLDEPL  LD  LRE+M GE+++L
Sbjct: 121 MVALAGYGARKPAQLSGGQRQRVALARALVNRPRVLLLDEPLGALDLKLREQMQGELKKL 180

Query: 184 HDEFNFTTVYVTHDQTEAMTISDRIAVLNLGKLEQIDTPWNLYNRPRTRFVAGFIGQTNL 243
             +   T ++VTHDQTEA+++SDR+AV N G++EQ+DTP NLY +P T FVA F+G +N+
Sbjct: 181 QRQLGITFIFVTHDQTEALSMSDRVAVFNRGRIEQVDTPRNLYMKPSTTFVAEFVGTSNV 240

Query: 244 VEGHVR---DGQIRLRGLEGVLPMGGQAAAASADMRIS-IRPQSLFLGPQGNGALPMGAV 299
           V G +    +G      +   L   G     S ++++S +     + G      L +   
Sbjct: 241 VRGELAMQINGSPAPFSIRPELIRLGDPVVTSHEVQVSGVLHDVQYQGSATRYELQLDNG 300

Query: 300 SVVARTYLGEYWDYLVRPTAGGDELKVHAP 329
            ++A +   + W   ++    G  L+ H P
Sbjct: 301 QLLAVSQANDRWQKQMQAWQLGQRLQAHWP 330