Pairwise Alignments

Query, 353 a.a., Spermidine/putrescine import ABC transporter ATP-binding protein PotA (TC 3.A.1.11.1) from Variovorax sp. SCN45

Subject, 342 a.a., ABC transporter, nucleotide binding/ATPase protein from Agrobacterium fabrum C58

 Score =  253 bits (645), Expect = 7e-72
 Identities = 139/295 (47%), Positives = 186/295 (63%), Gaps = 9/295 (3%)

Query: 1   MSKLELNNVRKQYGALA--VVDDLSLQLRKGELVTLLGPSGCGKTTTLRMIAGFIELSGG 58
           M+KL LN + K +GA +   VDD+SL +R G  + LLGPSGCGKTT LRMIAGF + S G
Sbjct: 1   MAKLILNRLSKNFGAGSKPAVDDVSLMVRDGGFLALLGPSGCGKTTVLRMIAGFEQPSDG 60

Query: 59  SIAVDGRQISGAGRTVPPEHRGMSMIFQSYAIWPNMTVAENVAFGLNVRRVPGEESKRRV 118
           SI +  R ++ AG  VPPE R M+M+FQSYA+WP+M+VA+N  + L VR + GE+ + +V
Sbjct: 61  SILLGERVLADAGSMVPPERRNMAMVFQSYALWPHMSVADNAGYPLKVRGISGEKYREKV 120

Query: 119 EEMLDVVKLGALAQRYPAELSGGQQQRVALARAMVVRPEVLLLDEPLSNLDANLREEMAG 178
            + L  V+L + A R PAELSGGQ+QRVALAR +V  P+V+LLDEPL+NLD +LR+EM  
Sbjct: 121 RQALAAVRLESFADRRPAELSGGQRQRVALARCLVTEPDVVLLDEPLANLDRHLRQEMEE 180

Query: 179 EIRRLHDEFNFTTVYVTHDQTEAMTISDRIAVLNLGKLEQIDTPWNLYNRPRTRFVAGFI 238
             R  H     T +YVTHDQ EAM ++  +AV++ G+L Q+  P  LY RP  R V   +
Sbjct: 181 TFRDFHARSGATMIYVTHDQAEAMALATDVAVMSQGRLLQVAAPAELYARPEGRLVGSLV 240

Query: 239 GQTNLVEGHVRDGQIR---LRGLEGVLPMGGQAAAASADMRISIRPQSLFLGPQG 290
            Q  ++   V DG  R     GL  V+  G     A     I +RPQ +    +G
Sbjct: 241 RQGAILRLPVPDGAPRDLDWAGLRAVMESGAPLPLAD----ILVRPQDVLRDAEG 291