Pairwise Alignments

Query, 400 a.a., L-carnitine dehydratase/bile acid-inducible protein F from Variovorax sp. SCN45

Subject, 406 a.a., putative CoA-transferase family III from Pseudomonas putida KT2440

 Score =  251 bits (640), Expect = 3e-71
 Identities = 152/408 (37%), Positives = 220/408 (53%), Gaps = 24/408 (5%)

Query: 11  LSGFKVLDLTIARAGPTAVRLLADWGADVTRVE------------PPALKDRGSVTGRRR 58
           LS  +VLDL+   AGP + ++LAD GADV +VE            PP LKD   V G   
Sbjct: 4   LSHLRVLDLSRVLAGPWSGQILADLGADVIKVERPGSGDDTRSWGPPFLKD---VEGEDT 60

Query: 59  GSDEQNL--HRNKRSLCLDLKTPQGADVLKRLIARSDVVAENFRSVVKERLGLTYEQLRK 116
                 L  +RNKRS+ +D   P+G  +++ L A+ D+V ENF+       GL Y+ L+ 
Sbjct: 61  SEAAYYLSANRNKRSVTIDFTQPEGQRLVRELAAKCDIVIENFKVGGLAAYGLDYQSLKA 120

Query: 117 INPRIILASISGFGQDGPYSDRPGVDQIVQGMSGLSSVTGEP----GRGAVRTGIAISDT 172
           +NP++I  SI+GFGQ GPY+ R G D ++QG+ GL S+TG P    G G V+ G+A++D 
Sbjct: 121 VNPQLIYCSITGFGQTGPYAKRAGYDFMIQGLGGLMSLTGRPEGEEGAGPVKVGVALTDI 180

Query: 173 TAGMFLGQGILLALLHRERTGEGQWVHTSLIEGMLNKLDFQGARYTVAGEIPVQEGNAHP 232
             G++    +L AL HR++TG GQ V  +L++  +  L  Q   Y   G  P + GNAHP
Sbjct: 181 LTGLYSAVAMLAALAHRDQTGVGQHVDMALLDVQVACLANQAMNYLTTGTPPRRLGNAHP 240

Query: 233 TQVPMSTFDASDGQVNICASTQYMWAGFCEALGAQKLHDNPDYKAFESRVANRRQLDTEV 292
             VP   F  +DG   +       +  F E  G  +  ++P +   + RVANR +L   +
Sbjct: 241 NIVPYQDFPTADGDFILTVGNDSQFRKFAEVAGQPQWAEDPRFVTNKLRVANRAELIPLI 300

Query: 293 NEVTRKFTVAELVARLNPAGVPCGPVYNIGQAFEDAQVKHLRMTRPAKHPVLGEVNLIRS 352
            + T   T AE VA+L  AGVPCGP+ N+ Q F+D QV    +     HP+ G V  + S
Sbjct: 301 RQATVFKTTAEWVAQLEAAGVPCGPINNLAQMFQDPQVLARGLALNIPHPLAGSVPQVAS 360

Query: 353 PINLSAFPHPEYFHHAAPDPGEQTDILL-EELGYSRDAIETMKSAGAV 399
           PI LS    P  +  A P  GE T+++L E LG     ++ ++ AG +
Sbjct: 361 PIRLS--ETPVEYRRAPPLLGEHTEVVLGEVLGLDAGEVQRLRDAGVL 406