Pairwise Alignments

Query, 339 a.a., TRAP-type C4-dicarboxylate transport system, periplasmic component from Variovorax sp. SCN45

Subject, 342 a.a., TRAP-type C4-dicarboxylate transport system, periplasmic component from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  147 bits (372), Expect = 3e-40
 Identities = 104/345 (30%), Positives = 170/345 (49%), Gaps = 13/345 (3%)

Query: 1   MTSLTRRRALRT--LSALPAAGIVTALPRIARAAEFSYKYGNNLPLTHPLNIRAQEAAER 58
           MT+L R+  LR   ++A  AA + T     A   + + +        HP  I   + +E 
Sbjct: 1   MTTLLRK-TLRPGLIAAAAAAAVFTTGLAQAEFQDRTVRISMTGSKDHPAGIALTKTSEC 59

Query: 59  IAKETKGRVEIKIFPNNQLGGDTDMLAQVRSGGIEFFTPSALVIATLVPVAAINAVGFAF 118
           +A ++ G+ +++ F    LG +   L QVRSG ++    +    A  VP   +  + F  
Sbjct: 60  LAAKSGGKFKMRPFFEAVLGPEQANLTQVRSGSLDGAVITTAATAPAVPQLGVFDLPFLV 119

Query: 119 NDYTQVWAAMDGKLGAHVRGAIAKARLYAFEKMWDNGFRQTTSSKAAVATAKDMDGLKIR 178
           +DY ++ A +DG  G  + G    A L      W++GFR  T+S+  +   +D+ GLK+R
Sbjct: 120 SDYKEIDALLDGAFGERLAGFYGAAGLVHLS-FWEHGFRNVTNSRRPINKLEDLQGLKLR 178

Query: 179 VPVSPLSISMFKGLGAAPASLQFSEVYSALQTKIVDAQENPLPIIQVAKLFEVQKFCSLT 238
           V  +   I  F  LGA P  + F+EVYSAL+TK +D QENP+  +Q +KL+EVQK  +LT
Sbjct: 179 VIQNKTFIDTFTQLGANPVPMPFTEVYSALETKAIDGQENPVAFLQTSKLYEVQKHVALT 238

Query: 239 NHIWDGYWFIANGRAWEALPEDLKTIVARAINDAGMQQREDIRKLNESV----VGDLQAK 294
            H++    FI +   ++ L  D +    +A+ D  M+ R   R+L   +       L+ +
Sbjct: 239 RHVYSPVNFIYSKTQYDKLAPDEQ----KALKDCAMENRLVNRQLGRDMEDKSAAYLKTQ 294

Query: 295 GLSINRPA-AESFRAKLRESGFYGEWKGRFGPEAWALLEGAVGKL 338
           G++I  P+ AE  R + +    Y       GP+    L   V K+
Sbjct: 295 GVAITEPSKAELERMREKTKVVYANQTAVLGPDLINALNAEVKKI 339