Pairwise Alignments

Query, 1059 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Variovorax sp. SCN45

Subject, 631 a.a., Sensory box protein from Pseudomonas putida KT2440

 Score =  422 bits (1086), Expect = e-122
 Identities = 231/580 (39%), Positives = 344/580 (59%), Gaps = 5/580 (0%)

Query: 468  WAVLSARRLVYQGQDALLTAFTPINHLKLME-QRLMLWAKVFEASSEGILIINGEHRILT 526
            W +LSA  L+Y  +  LL        L+  + +RL + A VF+++ EG+L+ + +  I+ 
Sbjct: 51   WVLLSAL-LIYVSRVRLLNFIGHGARLRCEDRERLRMAAAVFDSTLEGVLVTDRQGLIVH 109

Query: 527  ANRALCRLTGHDLGDLVGEPPEQLMSD--GSLHFADLWPVLDQRGTWQGEVTVRRRNGDS 584
             NRA  R+TG+   +++G+ P +  S   G   + +++  L ++G W GE+  RR++G+ 
Sbjct: 110  VNRAFMRITGYQQDEVIGQRPSKFKSGHHGLAFYQEVFATLAEKGEWSGEIWNRRKSGEI 169

Query: 585  YPAWLVASVVRDGPERISHYIFTSIDVSDRKRSEARIRFLAHHDVLTELPNRSLCIERLG 644
            YP W     +RD    +SHY+    D+S  K SE  + +LAHHD LT LPNR L  +RL 
Sbjct: 170  YPQWQTICAIRDDEGELSHYVAVFSDISAIKHSEQELAYLAHHDPLTGLPNRLLFTDRLE 229

Query: 645  LALQQAQRKGQRVGVLFIDLDRFKNINDSLGHHVGDALLRSVAARMSQAVRPGDTVSRLG 704
             AL  AQ   +   +L +DLD F++IND LGH +GD LL+ V  R+ + +  G T++RLG
Sbjct: 230  QALAAAQANKRGCALLLLDLDHFQSINDGLGHTIGDQLLKLVGERLGEVLGNGVTLARLG 289

Query: 705  GDEFVVVLNNVADGQEILSLVERRLISLIRQPHDIDGAEIHVSCSVGIAVYPDDAQDIDA 764
            GDEF V++ N     +   L +  +I  +R+P   DG  + +S SVGI++YP DA   + 
Sbjct: 290  GDEFGVLVENCQQVGQAGKLAQC-IIERMREPFQFDGNRLFISASVGISLYPSDALGAEQ 348

Query: 765  LMRHADVAMYQSKASGRDTARFFTPEMNERAQQRLQLESSLRHAIERDELSLHYQPRIDA 824
            L+R+AD A+Y++K++GR     +T E+   AQ R++  + LR A+E+DEL +++QP  D 
Sbjct: 349  LLRNADSALYKAKSNGRACYALYTEELTAHAQHRVETAAELRRALEQDELRVYFQPVHDL 408

Query: 825  HSGELICVEALLRWQSAELGQVRPAQFIPIAEESGQIVAIGAWVIEQACAQHAAWRRDGL 884
             SG  + VE L+RWQ    G V P +FIPIAE +G I  I  WV+ QAC Q   W+  G 
Sbjct: 409  ASGRQVGVETLVRWQHPRRGLVPPGEFIPIAERTGLIAEIDTWVLRQACRQMVQWQAQGR 468

Query: 885  GAIRVAINMSALQLRDGGLLEVLRGAIALYGVSPGDLEIELTESTLMDAAEQSLVQLHAL 944
                V +N+S+       L   +   +   G++P  LE+E+TES +M+  E +L QLH L
Sbjct: 469  QLAFVGVNISSRLFGQHELYRQVAEVLHDTGLAPALLELEVTESAVMEDPEVALEQLHRL 528

Query: 945  KSLGVMLSIDDFGTGYSSLNYLNRFPIDKLKIDRSFIHKMLGDPTDMAIARAIIGLGHTL 1004
            + LGV L+IDDFGTGYSSL  L R P+ KLKID+ F+  +  D  D+AI R II L  ++
Sbjct: 529  RELGVTLAIDDFGTGYSSLLRLKRLPVQKLKIDQGFVAGLPVDEDDIAIVRVIIALARSM 588

Query: 1005 GLRVVAEGVERREEADTLRAARCDELQGYLISRPMPAGKL 1044
            G++V AEG+E+ E+A  L    C   QGY   RP+PA  L
Sbjct: 589  GMQVHAEGIEQAEQASFLLQEECQLGQGYWFGRPVPAEDL 628