Pairwise Alignments

Query, 466 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 500 a.a., osmosensory proline/betaine/H+ permease from Pseudomonas putida KT2440

 Score =  101 bits (251), Expect = 6e-26
 Identities = 115/485 (23%), Positives = 203/485 (41%), Gaps = 60/485 (12%)

Query: 8   LDPASFSHMPTGDTSASLYDRDTLTPRQKFVVGVSAFAQMVDFLDFFLISFVITYIVGPW 67
           + P   S  P G    ++ D      + K  +  +A    +++ DF +  FV  Y +G  
Sbjct: 1   MKPRKKSVQPIGLKDITIVD----DAKMKKAITAAALGNAMEWFDFGVYGFV-AYALGKV 55

Query: 68  QLSVGQTTIILLSAGIGAS-------FGSFICGAIADRVGRRPVFLCTIALFTLCTGALA 120
                  ++ +++A    S        G    GA+ DR GR+ +   TI + +L T A+ 
Sbjct: 56  FFPNADPSVQMIAALATFSVPFLIRPLGGLFFGALGDRFGRQKILAATIVIMSLSTFAIG 115

Query: 121 LIPD----GAW--IWLTVLRFFVGFGATGMYSTNIPLLQEFMPTKKRSFATGLVASFIPV 174
           LIP     G W  I L + +   GF   G Y+     + E+ P +KR F    +      
Sbjct: 116 LIPSYASIGIWAPILLLLAKMAQGFSVGGEYTGASIFVAEYAPDRKRGFLGSWLDFGSIA 175

Query: 175 GVMLGSAIVFLFGTAV--------GWRGLFGIGFALGALLLAVGWRVPESPLWFISKDER 226
           G +LG+ +V L  T +        GWR  F +   LG + L +   + E+P         
Sbjct: 176 GFVLGAGVVVLISTVLGEEKFLDWGWRLPFFLALPLGIIGLYLRHALEETP--------- 226

Query: 227 ARARRSLAWALDESEDRVVVPAKAQDQPADRVTVREL-FQYPRKVIVSWVSILGSQVAYY 285
                    A  +  D++    +       +V+ +E+  Q+ R ++     ++ + V YY
Sbjct: 227 ---------AFQQHVDKLEQGDREGLASGPKVSFKEVATQHWRSLVTCIGVVIATNVTYY 277

Query: 286 GLTLWAPALLVAILHTTPSHAAFLLIFCNLADMGARLIFAYVSERAGRRLIGILQGFVG- 344
            L  + P+ L   LH +  H   ++I   +  +  + I   +S++ GRR   I+ G VG 
Sbjct: 278 MLLTYMPSYLSHNLHYSEDHGVLIIIAIMVGMLFVQPIIGLLSDKFGRRPF-IIVGSVGL 336

Query: 345 AALLVATSLTANAFIGGVSVFWLLLMATYF-FVSGGFSVTVPYVAEIWPSRLRATGLGSA 403
            AL +   +  N+ + G+    LL++A    F  G  + T+P    ++P+ +R + L SA
Sbjct: 337 LALAIPAFMLINSGVLGLIFAGLLIIAVLLNFFIGVMASTLP---AMFPTHIRYSALASA 393

Query: 404 YGVGSLGKIVGPLGLGLVLGTSKVTVDAVFPAF--CYLAAFLLLTGIVFLWLAEETRGRR 461
           + +  L   +  L   L     + T D   PA+    +AA  L+TG+      +ET  + 
Sbjct: 394 FNISVL---IAGLTPTLAAWLVETTNDLYMPAYYLMVIAAVGLVTGLTM----KETANKP 446

Query: 462 FEDAA 466
              AA
Sbjct: 447 LRGAA 451