Pairwise Alignments

Query, 310 a.a., Phenylacetate ABC transporter, permease protein 2 from Variovorax sp. SCN45

Subject, 435 a.a., High-affinity branched-chain amino acid transport system permease protein BraE from Pseudomonas putida KT2440

 Score =  172 bits (436), Expect = 1e-47
 Identities = 103/318 (32%), Positives = 164/318 (51%), Gaps = 22/318 (6%)

Query: 4   SRLRALGATALILAVLPFLLPNNFMLDIAIRIAFAAVAVIGLNLLMGFAGQISIGHAGFL 63
           SRLR +    +++A++  +  N ++L + I      +  +GLN+++G AG + +G+  F 
Sbjct: 103 SRLRYIIPALIVIAIVFPIFANKYLLTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFY 162

Query: 64  AIGAYGSAIATSRFGWPPLIAIAAAGIASAILAWLVAKPMLRLKGHSLTMATLGFGVIVN 123
           AIGAYG A+     G      +  A IA+A+   ++  P+LR+ G  L + TLGFG I+ 
Sbjct: 163 AIGAYGLALGYQYLGLGFWSVLPLAAIAAALAGCILGFPVLRMHGDYLAIVTLGFGEIIR 222

Query: 124 IVLINEVAVTGGPDGMAVPPLEVAGL----------------------ALTDLRHWYAGA 161
           +VL N ++ TGGP+GM  P     GL                      A       YA  
Sbjct: 223 LVLNNWLSFTGGPNGMPAPSPTFFGLEFGRRAKDGGVPIHEFFGFEYNASLKFVFIYAVL 282

Query: 162 AIVLWLAILLSLNLYDSPCGRALRGLHGSEVAARVVGVDVALFKTRAFVMSAVMASVSGS 221
            +V+   + +   L   P GRA   L   E+A R +G++  L K  AF + A  A ++G 
Sbjct: 283 FMVVLAVLYIKHRLTRMPVGRAWEALREDEIACRSMGLNHVLVKLSAFTLGASTAGLAGV 342

Query: 222 LTGHYVGFISPQMASFAHSVELATMVVLGGMASTFGAVLGSAVLTMLPQLLGGLHGYESI 281
               Y GF++P   +F  S  +  +VVLGGM ST G V+ + VLT+ P+LL     Y  +
Sbjct: 343 FFATYQGFVNPSSFTFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSFSEYRVL 402

Query: 282 LFGLILMLTMMFLPRGIV 299
           LFG++++L M++ PRG++
Sbjct: 403 LFGVLMVLMMIWRPRGLI 420