Pairwise Alignments

Query, 290 a.a., Phenylacetate ABC transporter, permease protein 1 from Variovorax sp. SCN45

Subject, 304 a.a., High-affinity branched-chain amino acid transport system permease protein BraD from Pseudomonas putida KT2440

 Score =  154 bits (390), Expect = 2e-42
 Identities = 96/298 (32%), Positives = 165/298 (55%), Gaps = 13/298 (4%)

Query: 6   QFVLSGLTTGAVYALAALGFTLIYNASGVINFAQGDFLMLSAMVAATLVTRQV-----PY 60
           Q +++GLT G+VY L A+G+T++Y   G+INFA G+  M+SA +AA  +          +
Sbjct: 7   QQLVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLAAISLALLAYFGVESF 66

Query: 61  PVAIALGLLATVVV----GLMLYRFAIRPAGDADVVTLIIITIGASIFIQGVVQVVLGKN 116
           P+ +   LL T+VV    G  + R A +P  ++  +  +I  IG S+ +Q   Q+  G  
Sbjct: 67  PLLMLGTLLFTIVVTGVYGFTIERIAYKPLRNSTRLAPLISAIGISLILQNYAQISQGAR 126

Query: 117 QQVLAPFSGDTPLNVLGA---RVLPQAMWVLGVGALMVAAVAAFFRYTLIGKATLAVAAN 173
           QQ +           +G+   ++    +++L    + +  +    +YT +G+   A   +
Sbjct: 127 QQGVPTLLEGAMRVEVGSGFVQLTYTKIFILVAAFVGMGLLTYVIKYTKLGRMCRATQQD 186

Query: 174 KLAASAVGIPTRRVLQLSFGLSALLGSVAGV-VAAPITTTVYDIGLMLGMKGFVAATLGG 232
           +  AS +GI T RV+   F + A++ ++AGV +     T  +  G ++G+K F AA LGG
Sbjct: 187 RKMASILGINTDRVISYVFVIGAVMAALAGVLITMNYGTFDFYAGFIIGIKAFTAAVLGG 246

Query: 233 LGSGLGAVVGGLIVGVLEALVAGYISSAYKDAVPFVMIIVILLVMPQGLFGRKSTERV 290
           +GS  GA++GG+I+G+ E+L +G I+S YKD   F ++++IL+  PQGL GR    +V
Sbjct: 247 IGSLPGAMLGGIILGISESLFSGLINSDYKDVFSFSLLVMILIFRPQGLLGRPLVAKV 304