Pairwise Alignments

Query, 290 a.a., Phenylacetate ABC transporter, permease protein 1 from Variovorax sp. SCN45

Subject, 293 a.a., putative Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  157 bits (397), Expect = 3e-43
 Identities = 95/294 (32%), Positives = 155/294 (52%), Gaps = 5/294 (1%)

Query: 1   MSDLAQFVLSGLTTGAVYALAALGFTLIYNASGVINFAQGDFLMLSAMVAATLVTRQVPY 60
           M+   + ++ GL  G +Y+L A+GF LIY ASGV NFAQG  ++ +A+   +L+ R VP+
Sbjct: 1   MAFFFEVLIGGLLAGVMYSLVAIGFVLIYKASGVFNFAQGAMVLFAALTFVSLLERGVPF 60

Query: 61  PVAIALGLLATVVVGLMLYRFAIRPAGDADVVTLIIITIGASIFIQGVVQVVLGKNQQVL 120
            ++  + L   + + L++ R  +RP      +TL + T+G +  I+G  Q + G     L
Sbjct: 61  WLSFLVTLATMIALALLIERAVLRPLVGRSPITLFMATLGLAYIIEGAAQALWGAQVHGL 120

Query: 121 APFSGDTPLNVLGARVLPQAMWVLGVGALMVAAVAAFFRYTLIGKATLAVAANKLAASAV 180
                D PL + G  +    ++     A +V  ++  F  T IG A  AVA +  AA +V
Sbjct: 121 ELAISDAPLELGGLLLSQFDLFAAATAAALVVLLSLLFNRTRIGLALRAVADDPRAAMSV 180

Query: 181 GIPTRRVLQLSFGLSALLGSVAGVVAAPITTTVYDIGLMLGMKGFVAATLGGLGSGLGAV 240
           GI   RV  + + ++  +G VAG++        + + L++ +K      +GG  S  GA+
Sbjct: 181 GIRLPRVWAVVWAVAGFVGLVAGLLWGARLGVQFSLSLVV-LKALPVLIIGGFTSISGAI 239

Query: 241 VGGLIVGVLEALVAGY----ISSAYKDAVPFVMIIVILLVMPQGLFGRKSTERV 290
           VGGLI+G  E L   Y    I    ++  P+V+ ++ LLV P GLFG ++ ERV
Sbjct: 240 VGGLIIGASEKLAEVYFGPLIGGGIENWFPYVLALLFLLVRPAGLFGERAIERV 293