Pairwise Alignments

Query, 384 a.a., ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 376 a.a., Leu/Ile/Val/Thr-binding protein from Xanthobacter sp. DMC5

 Score =  135 bits (341), Expect = 1e-36
 Identities = 121/394 (30%), Positives = 186/394 (47%), Gaps = 35/394 (8%)

Query: 1   MMEKLTRRALAVLAICSLGAMSPAFAQGKPIKIGAVVSATG-PASFLGDPQQKTLESYVQ 59
           M  +LTR  +A  A+    A +PAFA    +K+G V S +G  A+  G  Q+   E    
Sbjct: 2   MHARLTRLLIAATAVSL--ASAPAFAAD--VKLGIVQSTSGGSAALYGTMQKNGAELAAA 57

Query: 60  KINAGGGVLGRKLELVLYDDASDANKANAFARRLIIQDEVDAILGASTTGSTMAMVPQVE 119
           +INA G +   KL  V  DDA D  +     +RLI QD+V  I G + T S  A  P   
Sbjct: 58  EINASGKLGDLKLVPVHQDDAGDRGQTVNIFQRLINQDKVTVIFGPTLTTSAFAADPIAN 117

Query: 120 AAKIPNISLAAASVIVEPVRPWVFKMPHSDRMAAQKVLEEMKKRGFMQFA---------L 170
           AAK+P I+ +  +  V  +  ++F+    +      VL    KR   + A         L
Sbjct: 118 AAKVPVIASSNTAPGVPAIGEYIFRTSAPEAAVFPGVLAYAVKRYQPKTAAQIYGIDDVL 177

Query: 171 LSDTGGFGKSGRTETLKMAGALGMKVVEDQQYGEKDTDMTPQLTKVKSSPAQAILVFGTG 230
           +    G  K+   +        G+KVV  + + + D D + QLTK+K++    I+V G  
Sbjct: 178 MKAAYGVHKAALDKA-------GIKVVATETFQKGDVDYSAQLTKIKAANPDIIVVGGLA 230

Query: 231 QAPAIIARNYQQLGVQQPLYTTHGQA--STEFIRIAGKAAEGIRMPSPALLIAKALPASD 288
           +  A I R  +QLG+ Q        A  ST+   +AG AA+G  + S   +        D
Sbjct: 231 EETANIVRQARQLGIPQSTVFLGANAAISTKLNDLAGPAAQGFLVGSGWFI--------D 282

Query: 289 PQRDVSAEYVKAYEGQFKSDVSTFGGYAHDALLILVDAIKRAGG-TDKDKVRAALEQTKG 347
                +  +V+AY+ ++ +   TF   AH A+ I  DA+KRAGG +D  K+RAA+ +TK 
Sbjct: 283 FDTPANKAFVEAYKAKYGNAPDTFAAQAHAAVTIFADAVKRAGGVSDPAKLRAAIAETKD 342

Query: 348 FVGVSGIYTMSPQDHMGLDVTAFRMVEVKDGVFK 381
              V G ++    D     V   +++E+KDG F+
Sbjct: 343 LDTVLGPFSF---DKDREPVLVAKVLELKDGKFQ 373