Pairwise Alignments

Query, 734 a.a., Phytochrome, two-component sensor histidine kinase (EC 2.7.3.-) from Variovorax sp. SCN45

Subject, 747 a.a., histidine kinase from Pseudomonas simiae WCS417

 Score =  323 bits (828), Expect = 2e-92
 Identities = 236/733 (32%), Positives = 366/733 (49%), Gaps = 47/733 (6%)

Query: 9   LENCESEPIHIPGLVQPHGALIAFDASTLTVTRLSANTSALLGATTPAL-GQQLVPAHFA 67
           L NC  EPI  PG +QPHG L+      L + ++SAN  +L G    AL GQ L     A
Sbjct: 10  LANCADEPIRFPGAIQPHGVLLTLSEPDLNIIQVSANVGSLFGHAPEALLGQPLHTLVGA 69

Query: 68  GDALVHQTLHEVNDTAVASTEHSPVNVEVVVAGRRFDLIVHRMGYELVAEFEERSASADA 127
             A     + + N    A   H   N      G  F+ ++HR    LV EFE        
Sbjct: 70  EHAKAVAVMADHNTFFDAPPLHVTFN------GAEFEGLLHRHQNVLVLEFEP------L 117

Query: 128 VSDF---ALKAH-----RAMDRLKRQGSIDALLSLVVDTVHQLTGFDRVMAYRFRHDDSG 179
           + DF   ALK       + + RL+   ++ AL  + V+ +  +TG+DRV+ YRF  +  G
Sbjct: 118 LKDFRPRALKGRTSDLGKMLQRLQSAKTLQALYEISVNEIQAMTGYDRVLIYRFEDEGHG 177

Query: 180 DVVAERRHESLEPFLGRRYPASDIPAQARRLYVINTLRLIADVHAVPVALVVA---DTGL 236
            V+AE    S+E F G  +PASDIP QAR LY  N LR+I +    PV L+     DTG 
Sbjct: 178 QVIAEASAPSMELFNGLFFPASDIPEQARELYRTNWLRIIPNAAYEPVPLLPKLRPDTG- 236

Query: 237 PPLDMSHCTLRSVSPIHIEYLRNMGVGASMSISIVINGRLWGMLACHHRTMLQVPYAVRM 296
            PLD+S  TLRSVSPIH +Y++NMGV +SMSIS++    LWG+++C +R  L VP  +R 
Sbjct: 237 QPLDLSFATLRSVSPIHCQYMQNMGVLSSMSISLMKGDTLWGLISCGNREPLLVPNDLRT 296

Query: 297 ACDVLAQVLASNVQSLLAREQAARASDAAGLRARMIESVLHAED-TFSALAGLAPSLATA 355
           AC  + QVL+  + ++ A + + +  +     A + +++  +E+  F  LA     L   
Sbjct: 297 ACQTIGQVLSLQISAMEALDLSRQREEKVEALALLDQAMKRSEENVFDGLAQQGQLLMDL 356

Query: 356 FEAQAAVIAEQSRLHVEGEIPHDT-AAAVVQWLTVARAGDEIVALHERASLPENLQQMSG 414
             +    I E  +LH  G  P      A+ +WL     G+ + + H+ +S+     +   
Sbjct: 357 TLSGGVAIIEDKQLHRYGNCPEPAQIRALHKWL--QEGGEPVFSSHKLSSVYPPAAEFQQ 414

Query: 415 VWCGFLALRF-DAIDNGWLVLARKEQIETISWGGKPEK--HYVSGPLGPRLTPRGSFDIW 471
           V  G LA+     +DNG ++  R E  E I+W G P K     +   G RL PR SF+IW
Sbjct: 415 VASGVLAMSLPKPVDNG-VLWFRPEVKENINWSGDPRKPLDLENSDSGLRLRPRTSFEIW 473

Query: 472 KQTVRDTSVPWGALEIEFAHQVRDELIRAAAARNA----ELYKARTKLIAVLGHDLRDPL 527
           K  +   S  W   +   A+ +R   +    AR      +  +AR +L+AV+ HDLR+P+
Sbjct: 474 KVEMAGISTKWSHGDRFAANDLRRSALENDLARQVLREQQAVRARDELVAVVSHDLRNPM 533

Query: 528 QSISMAAKMLERSLPA-GNTLGERLGQRIQT---SSSRMGRLIGQVLDASRLQSGLGLQV 583
             ISM   M++++  + G     R+   I T   ++ RM  L+  +LD S++++G  + V
Sbjct: 534 TVISMLCGMMQQAFSSDGPHTSRRISSAIDTMQQAAGRMNVLLEDLLDTSKIEAGRYV-V 592

Query: 584 QPVPIDVARLLEDAVD--EALTAYPGSQIELHAPKSLAMVGDPDRMAQLIGNLVSNARHH 641
           +PV +DV+++ ++A      L    G  +  +A   L +  DP+R+ Q++ NL+ NA   
Sbjct: 593 RPVSLDVSQMFDEAYSLLAPLAMEKGIDLSFNAEPGLQINADPERLFQVLSNLIGNAIKF 652

Query: 642 GLPGEPVRVILEQAHDNVVLRVANTAPAIDPALVPELFSAFKRQTGPNIRNKGGLGLGLH 701
                 + +    + + +V  V ++   I P  +P +F  +  QT     N  G GLGL+
Sbjct: 653 TPRQGNIGISAMSSGEEIVFSVRDSGEGIAPEQLPHVFDRYWTQTE---NNPTGSGLGLY 709

Query: 702 IAQAIARSHHGSI 714
           I Q I ++H G I
Sbjct: 710 ITQGIVQAHGGKI 722