Pairwise Alignments

Query, 347 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

Subject, 306 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score =  271 bits (693), Expect = 2e-77
 Identities = 145/294 (49%), Positives = 196/294 (66%), Gaps = 1/294 (0%)

Query: 36  EPEIDDARKELVSLLKHIMGGQDGTVITAVPGLHVFCISKPEGPKHAFASPALGLIAQGS 95
           EP ++  R EL  L+    G   G   +A+  L++   ++        A PAL ++AQGS
Sbjct: 8   EPTLELQRLELAELINRHAGEPFGPA-SAIDDLYLVRYTENVRSVPTLAQPALCILAQGS 66

Query: 96  KRIIVGDDIYVYDPMHYLVTSVDLPVCGQVRVASNNEPYLGLRLELALDDIGELIRDDKL 155
           K + +GD+ Y YDP+HY+V SV LP+      AS   P LGLR++L   +I +LI +   
Sbjct: 67  KSLFLGDEQYAYDPLHYMVVSVTLPLSAVRLDASPENPSLGLRMDLDPAEISQLIAESGP 126

Query: 156 PAKANAPASRGMYVNRIAMPVLEPVLRLLRLLDTPEDVPIMAPLIKREIMYRLLVNGEGA 215
               N P+ RG+YV R    +L+ +LRLLRLLDTP D+ ++APL +REI+YRLL   +G 
Sbjct: 127 MLVPNRPSGRGLYVERTDAALLDALLRLLRLLDTPRDIAMLAPLFRREILYRLLRGPQGY 186

Query: 216 RLRQIALQDSHTQRIAKAISALRVNYAQSLRVEDMARAVHMSVSSFHHHFKAVTAMSPLQ 275
           RL +IAL +S T R+ +AI+ L  N+ Q LR+ED+AR V++S S+ HH FKAVT+MSPLQ
Sbjct: 187 RLYEIALANSQTHRVCQAITWLNNNFQQPLRIEDLAREVNLSTSTLHHRFKAVTSMSPLQ 246

Query: 276 YQKQLRLQEARRQMLIAGADVASAAHNVGYESPSQFAREYGRMFGAPPLRDKRR 329
           YQKQLRLQEARR ML  G + A AA+ VGYESPSQF+REY R++GAPP+RD  R
Sbjct: 247 YQKQLRLQEARRLMLNDGLEAAVAAYRVGYESPSQFSREYSRLYGAPPIRDVAR 300