Pairwise Alignments

Query, 472 a.a., MATE efflux family protein from Variovorax sp. SCN45

Subject, 467 a.a., multidrug transporter from Pseudomonas simiae WCS417

 Score = 83.2 bits (204), Expect = 2e-20
 Identities = 106/455 (23%), Positives = 185/455 (40%), Gaps = 29/455 (6%)

Query: 26  AARPLWKVFLLFLAPMLLSNILQSLSGTLNNIYVGQM----LGVGALAAVSSFFPVMFFF 81
           A   LW +  L   P++ S +   L    + + + ++    L  G L A S  F  +F  
Sbjct: 7   ARTELWAILRLS-GPLIASQLAHMLMVLTDTLMMARLSPEALAGGGLGAASYSFVSIF-- 63

Query: 82  IAFIIGLGAGASVLIGQAWGARDAAKAKAVAGTTLTVGVLTGLVIAVFGGAFTTPMLASL 141
               IG+ A    L+    GA D   A  +    L +  L  L   +       P+L   
Sbjct: 64  ---CIGVIAAVGTLVAIRHGAGDIEGATRLTQAGLWLAWLMALAAGLLLWNLK-PLLLLF 119

Query: 142 GTPPDVLADSTRYARIMLIAMPGLFVFLLATAMLRGVGDTVTPLLTLMISTLIGLVVTPA 201
           G     +  + ++  I+  A+PG   F+        +G     ++  +   +   ++  A
Sbjct: 120 GQTETNVHSAGQFLTILPFALPGFLSFMALRGFTSAIGKAQPVMVISLGGAVANYLLNHA 179

Query: 202 LIRGWGGLPQLGVAS-GAWASVLSFTVATIWLGFRLRQRKSPLAPDAEFMRNLRIQPQLL 260
           LI G  GLP+LG+   G   +V++  +A   + +  R R     P +  +  LR+  Q L
Sbjct: 180 LIEGMFGLPKLGLMGIGLVTAVVANGMALALMWYIHRNRTYAAYPLSTGL--LRLNTQYL 237

Query: 261 KAVLKIGVPT-GVQMIVVALAEVVLLSMVNSYGSSATAAYGAVNQV--VAYVQFPAISIA 317
           + + ++G+P  G   + V L     L M  + GS+  AA+    Q+  VA++    +S A
Sbjct: 238 RELWRLGLPIGGTYAVEVGLFAFAALCM-GTMGSTQLAAHQIALQIVSVAFMVPAGMSYA 296

Query: 318 ITASILGAQAIGAGRANRLGAIAKTALLMNVVLTGGLVVLGYLFSRHLMAFFIT-SEP-- 374
           +T  I   Q  GAG+  +     +  +     +  G   + +L+S  L+   I  ++P  
Sbjct: 297 VTMRI--GQHYGAGQLLQARLAGRVGIGFGAAVMLGFAAVLWLYSDPLIGLLIDHNDPAF 354

Query: 375 --VLEIAQTLLHIMLWSLVIFGMASALSGIMRASGSVLVPTLISIVCILGVEVPVAYAMS 432
             V+ +A +LL +  W  +  G+ +   G +R         LI   C   +  P A+ M+
Sbjct: 355 HDVIVLAVSLLAVAAWFELFDGVQTIAMGCIRGLKDAKTTFLIGAGCYWLIGAPSAWLMA 414

Query: 433 HRLGLDGIWIAYPVTFGAMLLLQTAYYQLVWRKKA 467
             LG    W    V +G  L L  A   L W  +A
Sbjct: 415 FTLG----WGPTGVWWGLALGLACAAVSLTWAFEA 445