Pairwise Alignments

Query, 472 a.a., MATE efflux family protein from Variovorax sp. SCN45

Subject, 462 a.a., Probable multidrug resistance protein NorM from Pseudomonas putida KT2440

 Score = 92.4 bits (228), Expect = 3e-23
 Identities = 110/455 (24%), Positives = 187/455 (41%), Gaps = 34/455 (7%)

Query: 32  KVFLLFLAPML---LSNILQSLSGTLNNIYVG-QMLGVGALAAVSSFFPVMFFFIAFIIG 87
           K  L    P++   L+++L  L+ TL    +  Q L  G L A S  F  +F      +G
Sbjct: 10  KALLRLAGPLIASQLAHMLMVLTDTLMMARISPQALAGGGLGAASYSFVSIF-----CLG 64

Query: 88  LGAGASVLIGQAWGARDAAKAKAVAGTTLTVGVLTGLVIAVFGGAFT---TPMLASLGTP 144
           + A    L+    GA D   A  +A      G+     +A+F         P+L   G  
Sbjct: 65  VIAAVGTLVAIRKGANDIEGATRLAQN----GLWLAWALALFAALVLWNLEPVLLLFGQK 120

Query: 145 PDVLADSTRYARIMLIAMPGLFVFLLATAMLRGVGDTVTPLLTLMISTLIGLVVTPALIR 204
           P+ +A +  +  ++ +A+PG   F+        +G +   ++  +  T++  +   ALI 
Sbjct: 121 PENVASAAEFLTLLPLALPGYLTFMALRGFTSALGRSTPVMVISLFGTVLNYLFNVALIE 180

Query: 205 GWGGLPQLGVAS-GAWASVLSFTVATIWLGFRLRQRKSPLAPDAEFMRNLRIQPQL--LK 261
           G  GLP+LG+   G   +V+S  +AT      L  R  P A  A  +R    +P L  L+
Sbjct: 181 GMFGLPKLGLMGIGLVTAVVSMGMAT---ALALYIRWHP-AYTAYPLRKGLSRPSLAALR 236

Query: 262 AVLKIGVPT-GVQMIVVALAEVVLLSMVNSYGSSATAAYGAVNQVV--AYVQFPAISIAI 318
            + ++G+P  G  M+ V L     L M    GS+  AA+    Q+V  A++    +S A+
Sbjct: 237 ELWRLGLPIGGTYMVEVGLFAFAALCM-GVLGSTELAAHQIALQIVSTAFMVPTGLSYAV 295

Query: 319 TASILGAQAIGAGRANRLGAIAKTALLMNVVLTGGLVVLGYLFSRHLMAFFI-TSEP--- 374
           T  +      GAG      +  +  +    ++      L  L    L+  FI  ++P   
Sbjct: 296 TMRV--GLYYGAGNLLAARSAGRVGIGFGAMIMFAFATLFLLLPEALVGLFIDRNDPAFA 353

Query: 375 -VLEIAQTLLHIMLWSLVIFGMASALSGIMRASGSVLVPTLISIVCILGVEVPVAYAMSH 433
            + ++A  LL +  W  +  GM +   G +R         LI +VC   V  P A+  + 
Sbjct: 354 AIFQVAVQLLMVAAWFELFDGMQTIAMGSIRGLKDAKTTFLIGLVCYWLVGAPSAWLFTF 413

Query: 434 RLGLDGIWIAYPVTFGAMLLLQTAYYQLVWRKKAI 468
            LG   + I + +  G         +   WR K +
Sbjct: 414 TLGGGAVGIWWGLALGLACAAVALTFGFEWRMKRL 448