Pairwise Alignments

Query, 632 a.a., TRAP-type C4-dicarboxylate transport system, large permease component from Variovorax sp. SCN45

Subject, 425 a.a., TRAP-type C4-dicarboxylate transport system, large permease component from Variovorax sp. SCN45

 Score =  225 bits (573), Expect = 3e-63
 Identities = 132/402 (32%), Positives = 220/402 (54%), Gaps = 4/402 (0%)

Query: 220 ALGMPIAFVLALSSLVFFMADPSLPMLVYSQQVMAGTDHYVLLAIPFFVLAGLLMEANGM 279
           AL + +A  + L+S++      +  ML+  +++    + + L AIPFF+LAG LME  G+
Sbjct: 14  ALSISVAVSIGLASILGIQVT-NANMLISVKEMFNSINKFPLAAIPFFILAGNLMETGGI 72

Query: 280 SSRLIELLLRMFGRLRGGLGLITITATAFFSGVSGSKLADIAAVGGIIMPAVRKTKQDPN 339
           S RL+E    + G ++GGL +  +     F+ VSGS +A   A+G I++PA+ K     +
Sbjct: 73  SRRLVEFAKSIVGGVQGGLPMTCVLTCMIFAAVSGSSVATTFAIGAILIPALIKHGYPTS 132

Query: 340 ETAGLLACTAVMAETIPPCINMIIMGFVANISIAGLFMAGLVPAVVLAVSLAA-VTIYVG 398
             A L A +A +   IPP I MI+ G  A +SI  LF+AG  P ++++++L   V +Y  
Sbjct: 133 YAAALQATSAELGVIIPPSIPMILYGVSAEVSIGELFIAGFGPGILISLALMLFVWVYCK 192

Query: 399 TKINPDEAFDVRTPMFRLLGGALVALVMVAMIGKGVTSGVATSTEVSSFAVIYALVVGWL 458
            K       + R P  R L  A  AL+M  +I  G+  GV T TE S+ AV YALVVG +
Sbjct: 193 WKGWGKNDGEGRMPFGRALWQAGWALLMPVIILGGIYGGVFTPTEASAVAVFYALVVGMV 252

Query: 459 AFRELTVKSVARLFVRSASMAGGILFIVAAASSLSFALTIQQIPQYLSEFMIGFAHSYGS 518
            +RE+ +K +  +  +S   +  I+FI+A A   +F +T   +P  +  ++     S   
Sbjct: 253 IYREIKLKDLYVILRKSVMSSAVIMFIIANAGLFAFLITRAGVPDAIGHWLQQVLQS--P 310

Query: 519 TMFVMLSVLIMIVFGAILEGAPALIIFGPLLTPIASQLGVNPLHFGTVMVIAMGFGLFAP 578
            MF++     + V G  +E + A+I+  P+L P+A   G++P+HFG +MV+ +  G+  P
Sbjct: 311 AMFLLGVNAALFVIGMFIETSAAIIVLAPILAPVAVHFGIDPVHFGLIMVVNLALGMITP 370

Query: 579 PVGLGLFATCAITGTQVKDVARPMLKYLAVLFVTLVVLVLVP 620
           P G+ LFA C +    +  + R ++ ++ V+   L+V+  VP
Sbjct: 371 PFGVNLFAACTVARISLDRIVRHLVPFVLVIMACLMVITYVP 412