Pairwise Alignments

Query, 526 a.a., Uncharacterized MFS-type transporter from Variovorax sp. SCN45

Subject, 520 a.a., Multidrug efflux system EmrAB-OMF, inner-membrane proton/drug antiporter EmrB (MFS type) from Variovorax sp. SCN45

 Score =  177 bits (450), Expect = 6e-49
 Identities = 113/414 (27%), Positives = 194/414 (46%), Gaps = 16/414 (3%)

Query: 28  ASKPWVLAAAIVGSSMAFIDGTVVNVALPAIQSDLHATAFQAQWVVESYALLLAALLLVG 87
           A++ W   A    + M  +D ++ NV+LPAI  DL  +  Q  WV+ S+A+  A  + + 
Sbjct: 17  AARVWGTVALSAATFMNVLDSSIANVSLPAISGDLGVSTTQGTWVITSFAVANAIAVPLT 76

Query: 88  GALGDLYGRRRIFAIGVGLFALSSVACALAGSVQQLIAARAVQGIGGALLVPGSLALISA 147
           G +   +G+ R+F   V LF ++S+ C LA ++  LI  RA+QG     ++P S  L+ +
Sbjct: 77  GFMTQRFGQVRLFMASVILFMVASLLCGLAPNMTTLILFRALQGFVAGPMIPLSQTLLLS 136

Query: 148 AFPEKERGKAIGTWSGFSGITAAVGPVLGGFLVDHFSWTWAFLINLPMALLVLWIVWRHV 207
           ++P  + G A+  WS  + +   +GP+LGG++ D+ SW W F IN+P+ ++   I W   
Sbjct: 137 SYPRAKAGLAMAMWSMTTLVAPVMGPLLGGWITDNISWPWIFYINIPVGIVAASITWALY 196

Query: 208 PESRGASAAGGLDVWGALLATAGLGGIVYAFIEAPTQGW-RAPAVLAALAIGVLGSAGFF 266
            +    +    +D  G  L    +G +     +     W  +P ++    + V+G A F 
Sbjct: 197 HKRESVTHKVPIDAIGLALLVLFVGSMQLMLDKGKELDWFHSPQIVTMAVVAVVGFAFFL 256

Query: 267 VAERRVRSPMLPLGLLRIGNFSGANLLTLLLYAALGGGLYFFPLNLIQVQGYSATVAGAA 326
           V E   + P++ L L +  NF    + T + Y    G +   PL L Q  GY+AT AG  
Sbjct: 257 VWELTDKHPVVDLSLFKRRNFWSGAVATAVAYGLFFGNVVLLPLWLQQWMGYTATQAGMI 316

Query: 327 LLPFIFIMFALSGWAGQLVDRFGSRIPLVAGPSIAAVGFALFAVP-------GVGASYWS 379
           + P   +    S   G  V +   R         A   F +FA+           A + +
Sbjct: 317 MAPVGMLAIFFSPIVGLTVSKIDPR-------RYATFSFLVFALVLWMRSNFNTQADFVT 369

Query: 380 GFLPAVVVLGLGMAVTVAPLTTTVMNAVGPEMAGVASGVNNAVSRAAAVLAIAV 433
             +P  V+ G+ MA    PL T  ++ + P+    ASG++N +   A  +  ++
Sbjct: 370 IIIP-TVIQGIAMAFFFIPLVTITLSGLTPDRIPAASGLSNFLRITAGAMGTSL 422