Pairwise Alignments

Query, 526 a.a., Uncharacterized MFS-type transporter from Variovorax sp. SCN45

Subject, 475 a.a., predicted multidrug or homocysteine efflux system (NCBI) from Escherichia coli BW25113

 Score =  173 bits (438), Expect = 1e-47
 Identities = 126/416 (30%), Positives = 197/416 (47%), Gaps = 16/416 (3%)

Query: 28  ASKPWVLAAAIVGSSMAFIDGTVVNVALPAIQSDLHATAFQAQWVVESYALLLAALLLVG 87
           A  PW+ A A     M  +D T++N ALPAI   L+ +    Q  + SY L +A L+ V 
Sbjct: 10  AGLPWIAAMAFF---MQALDATILNTALPAIAHSLNRSPLAMQSAIISYTLTVAMLIPVS 66

Query: 88  GALGDLYGRRRIFAIGVGLFALSSVACALAGSVQQLIAARAVQGIGGALLVPGSLALISA 147
           G L D +G RRIF + V LF L S+ACAL+ S+ QL+  R +QGIGGA+++P +   +  
Sbjct: 67  GWLADRFGTRRIFTLAVSLFTLGSLACALSNSLPQLVVFRVIQGIGGAMMMPVARLALLR 126

Query: 148 AFPEKERGKAIGTWSGFSGITAAVGPVLGGFLVDHFSWTWAFLINLPMALLVLWIVWRHV 207
           A+P  E    +   +    +   +GPVLGG LV   +W W FLIN+P+ +  L    +H+
Sbjct: 127 AYPRNELLPVLNFVAMPGLVGPILGPVLGGVLVTWATWHWIFLINIPIGIAGLLYARKHM 186

Query: 208 PESRGASAAGGLDVWGALLATAGLGGIVYA-----FIEAPTQGWRAPAVLAALAIGVLGS 262
           P     +A    D+ G LL   GL  ++++     F E     W A  V+   +IG+L  
Sbjct: 187 PNF--TTARRRFDITGFLL--FGLSLVLFSSGIELFGEKIVASWIALTVIVT-SIGLL-- 239

Query: 263 AGFFVAERRVRSPMLPLGLLRIGNFSGANLLTLLLYAALGGGLYFFPLNLIQVQGYSATV 322
             + +  RR  +P++ L L +   FS   +  +      G   +  PL L    GY A +
Sbjct: 240 LLYILHARRTPNPLISLDLFKTRTFSIGIVGNIATRLGTGCVPFLMPLMLQVGFGYQAFI 299

Query: 323 AGAALLPFIFIMFALSGWAGQLVDRFGSRIPLVAGPSIAAVGFALFAVPGVGASYWSGFL 382
           AG  + P             Q++ R G R  LV    I  +  A F++     + W   L
Sbjct: 300 AGCMMAPTALGSIIAKSMVTQVLRRLGYRHTLVGITVIIGLMIAQFSLQSPAMAIWMLIL 359

Query: 383 PAVVVLGLGMAVTVAPLTTTVMNAVGPEMAGVASGVNNAVSRAAAVLAIAVFGAVM 438
           P + +LG+ M+     + T  +  +  + A   + V     + +  L +AV  AV+
Sbjct: 360 P-LFILGMAMSTQFTAMNTITLADLTDDNASSGNSVLAVTQQLSISLGVAVSAAVL 414